RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 TSPAN10Q9H1Z9 355 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 NIPAL2Q9H841 368 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 RBFOX1Q9NWB1 397 aaKnown RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 HRH3Q9Y5N1 445 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 A0A0G2JMP0 313 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 AKR1C2P52895 323 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 SELENBP1Q13228 472 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PRSS45Q7RTY3 260 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 LYSMD2Q8IV50 215 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 OR4M2Q8NGB6 313 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 FAM3DQ96BQ1 224 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 ORAI1Q96D31 301 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 SPACA9Q96E40 222 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 C11orf54Q9H0W9 315 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PCDHGA3Q9Y5H0 932 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 IGHV3-15A0A0B4J1V0 119 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 CXCL13O43927 109 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PEBP1P30086 187 aaKnown RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 ZNF93P35789 620 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 FAM27D1Q5T7N8 215 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PXKQ7Z7A4 578 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 SNIP1Q8TAD8 396 aaKnown RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 IL1F10Q8WWZ1 152 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 ELMOD3Q96FG2 381 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PHB2Q99623 299 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 SYT3Q9BQG1 590 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 MENTQ9BUN1 341 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 KCNN3Q9UGI6 736 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 KCNG2Q9UJ96 466 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PCOLCE2Q9UKZ9 415 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 SIGLEC7Q9Y286 467 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 MRPS28Q9Y2Q9 187 aaKnown RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PRSS37A4D1T9 235 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 S100A9P06702 114 aaKnown RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 UBCP0CG48 685 aaKnown RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 APEHP13798 732 aaKnown RBP11.18□□□□□ -0.62
TCOF1-205ENST00000439160 HMGA2P52926 109 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 TAS2R19P59542 299 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PWWP2BQ6NUJ5 590 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PIGTQ969N2 578 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 C3orf49Q96BT1 292 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 OBP2BQ9NPH6 170 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 FAM86C1Q9NVL1 165 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 A3GALT2U3KPV4 340 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 GPR179Q6PRD1 2367 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 NPSR1Q6W5P4 371 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 DEFB127Q9H1M4 99 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 ZNF587BE7ETH6 402 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 ZNF806P0C7X5 589 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 IL13RA1P78552 427 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 EMC4Q5J8M3 183 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 EXOSC6Q5RKV6 272 aaKnown RBP11.17□□□□□ -0.62
TCOF1-205ENST00000439160 OR5L1Q8NGL2 311 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 TTC9Q92623 222 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 PRRT1Q99946 306 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 TXNIPQ9H3M7 391 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 DNAJB11Q9UBS4 358 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 SLC5A6Q9Y289 635 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 B3GALT5Q9Y2C3 310 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 NPIPB8E9PQR5 432 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 HRKO00198 91 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 VAMP5O95183 116 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 TPOP07202 933 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 IRF2P14316 349 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 ZNF117Q03924 483 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 C12orf73Q69YU5 71 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 LCN10Q6JVE6 187 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 C7orf50Q9BRJ6 194 aaKnown RBP11.17□□□□□ -0.62
TCOF1-205ENST00000439160 DNAJB12Q9NXW2 375 aaKnown RBP11.17□□□□□ -0.62
TCOF1-205ENST00000439160 SLC22A13Q9Y226 551 aa11.17□□□□□ -0.62
TCOF1-205ENST00000439160 H3BUI4 141 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 HRO43593 1189 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 UBE2IP63279 158 aaKnown RBP11.16□□□□□ -0.62
TCOF1-205ENST00000439160 VHLLQ6RSH7 139 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 TRAPPC6BQ86SZ2 158 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 CRIPAKQ8N1N5 446 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 BHLHE23Q8NDY6 225 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 OR10G3Q8NGC4 313 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 OR6F1Q8NGZ6 308 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 YIPF6Q96EC8 236 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 ACKR4Q9NPB9 350 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 A0A0A6YYH2 397 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 LOC107986453A0A1B0GWG9 222 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 PLSCR5A0PG75 271 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 A6NJ64 397 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 PATE3B3GLJ2 98 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 PRAF2O60831 178 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 NTN1O95631 604 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 PSMB1P20618 241 aaKnown RBP11.16□□□□□ -0.62
TCOF1-205ENST00000439160 TBXA2RP21731 343 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 BLVRBP30043 206 aaPredicted RBP11.16□□□□□ -0.62
TCOF1-205ENST00000439160 TNK1Q13470 666 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 TPBGQ13641 420 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 ZNF74Q16587 644 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 TMEM81Q6P7N7 255 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 TMPRSS11FQ6ZWK6 438 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 SIAH3Q8IW03 269 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 STEAP2Q8NFT2 490 aa11.16□□□□□ -0.62
TCOF1-205ENST00000439160 SLAMF6Q96DU3 332 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms