RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 KCNA7Q96RP8 456 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 KCNK16Q96T55 309 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 TEKT3Q9BXF9 490 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 FRMD8P1Q9BZ68 369 aaPredicted RBP2.46□□□□□ -2.02
LINC01040-201ENST00000425048 ACTR6Q9GZN1 396 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 BLZF1Q9H2G9 400 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 SPNS1Q9H2V7 528 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 Q9H3A6 140 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 C11orf49Q9H6J7 331 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 COPS7BQ9H9Q2 264 aaPredicted RBP2.46□□□□□ -2.02
LINC01040-201ENST00000425048 CAB39LQ9H9S4 337 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 EFCAB1Q9HAE3 211 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 CYP3A43Q9HB55 503 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 ANKHQ9HCJ1 492 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 CCDC59Q9P031 241 aaKnown RBP2.46□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF282Q9UDV7 671 aaPredicted RBP2.46□□□□□ -2.02
LINC01040-201ENST00000425048 GIMAP2Q9UG22 337 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 MAD2L2Q9UI95 211 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF639Q9UID6 485 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 BTNL2Q9UIR0 455 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 PPIL1Q9Y3C6 166 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 ASB4Q9Y574 426 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 FKBP7Q9Y680 259 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 LMO7Q8WWI1 1683 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 PIK3C2BO00750 1634 aa2.46□□□□□ -2.02
LINC01040-201ENST00000425048 DOCK1Q14185 1865 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 DDX60LQ5H9U9 1706 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 NRAPQ86VF7 1730 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TOGARAM1Q9Y4F4 1720 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SCN9AQ15858 1988 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TUBAL3A6NHL2 446 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 METTL15A6NJ78 407 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 H7C0S8 307 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 OR7A17O14581 309 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TOX3O15405 576 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 RGS5O15539 181 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SGCEO43556 437 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SELENOFO60613 162 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SNNO75324 88 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 EIF3GO75821 320 aaKnown RBP eCLIP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MMP23AO75900 390 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 BCAS2O75934 225 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 OR2B3O76000 313 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 GABARAPO95166 117 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 LYPLA2O95372 231 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 DEXIO95424 95 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 CXCL14O95715 111 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TGM6O95932 706 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 IFNGP01579 166 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TNNC2P02585 160 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MT-ND3P03897 115 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MMP1P03956 469 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 S100A9P06702 114 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 HTR1AP08908 422 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 GNAO1P09471 354 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 H2AFZP0C0S5 128 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ANXA8P13928 327 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MUC1P15941 1255 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 CBR1P16152 277 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF823P16415 610 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 STMN1P16949 149 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TNNI1P19237 187 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 BGNP21810 368 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 IGFBP5P24593 272 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 LAP3P28838 519 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 GTF2E2P29084 291 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ETV6P41212 452 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 KIR3DL2P43630 455 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 YAP1P46937 504 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PSMD8P48556 350 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 NUMBP49757 651 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SULT1E1P49888 294 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 GNG10P50151 68 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PLA2G16P53816 162 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ARPP19P56211 112 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 RAB4BP61018 213 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SNRPD2P62316 118 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SLAMF1Q13291 335 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 KRR1Q13601 381 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 CUL2Q13617 745 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PTK6Q13882 451 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PDK2Q15119 407 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PON3Q15166 354 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 IRF4Q15306 451 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 NRF1Q16656 503 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MICBQ29980 383 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 HFEQ30201 348 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ADPRMQ3LIE5 342 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 DCAF4L1Q3SXM0 396 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SLC36A3Q495N2 470 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TEX44Q53QW1 395 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PIGGQ5H8A4 983 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 OR2B11Q5JQS5 317 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ANXA8L1Q5VT79 327 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TIGD3Q6B0B8 471 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ELP2Q6IA86 826 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SULT1C3Q6IMI6 304 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 FRMPD2BQ6IN97 320 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PNCKQ6P2M8 343 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TTC33Q6PID6 262 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms