RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 EMC8O43402 210 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 LMX1BO60663 402 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 FKBP6O75344 327 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 ZFAND5O76080 213 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 MYO1DO94832 1006 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 GJB5O95377 273 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 STSP08842 583 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 OCMP0CE72 109 aaPredicted RBP3.88□□□□□ -1.79
LSM5-205ENST00000409952 T-ENOLP0DO92 83 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 LAMP1P11279 417 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 VDAC1P21796 283 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 HMGCLP35914 325 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 ARR3P36575 388 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 DNASE1L1P49184 302 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 EMP2P54851 167 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 HILS1P60008 231 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 SLC35B1P78383 322 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 QRICH1Q2TAL8 776 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 NDUFAF6Q330K2 333 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 ZNF506Q5JVG8 444 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 C9orf66Q5T8R8 295 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 RNLSQ5VYX0 342 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 RUSC1-AS1Q66K80 236 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 C11orf71Q6IPW1 123 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 REG3GQ6UW15 175 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 VKORC1L1Q8N0U8 176 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 CDRT4Q8N9R6 151 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 OR6K6Q8NGW6 343 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 OR6K2Q8NGY2 324 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 NDRG1Q92597 394 aaKnown RBP3.88□□□□□ -1.79
LSM5-205ENST00000409952 FGF14Q92915 247 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 FOXC2Q99958 501 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 CNPY3Q9BT09 278 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 SELENOIQ9C0D9 397 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 SRRQ9GZT4 340 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 ZBP1Q9H171 429 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 OR51J1Q9H342 316 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 JPT2Q9H910 190 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 UCK1Q9HA47 277 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 MRM3Q9HC36 420 aaKnown RBP3.88□□□□□ -1.79
LSM5-205ENST00000409952 RMND1Q9NWS8 449 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 V9GY05 133 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 ADCY9O60503 1353 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 COL22A1Q8NFW1 1626 aaPredicted RBP3.88□□□□□ -1.79
LSM5-205ENST00000409952 FRMPD3Q5JV73 1810 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 TMEM213A2RRL7 107 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 HCRTR1O43613 425 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 AQP8O94778 261 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 LDOC1O95751 146 aaPredicted RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 OXTP01178 125 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 CATP04040 527 aaKnown RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 GFAPP14136 432 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 ATP6V1B2P21281 511 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 CMA1P23946 247 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 KIR2DS4P43632 304 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 HAAOP46952 286 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 VSNL1P62760 191 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 SLC25A11Q02978 314 aaKnown RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 ZNF92Q03936 586 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 ZNF718Q3SXZ3 478 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 ZNF876PQ49A33 203 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 STPG1Q5TH74 334 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 FAHD1Q6P587 224 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 PLEKHG7Q6ZR37 379 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 DNM1P46Q6ZS02 220 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 TMUB2Q71RG4 321 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 UNC93AQ86WB7 457 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 C17orf82Q86X59 251 aaPredicted RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 ABHD12Q8N2K0 398 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 C4orf32Q8N8J7 132 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 HSD17B11Q8NBQ5 300 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 OR4Q3Q8NH05 313 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 AGAP11Q8TF27 550 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 NPRL2Q8WTW4 380 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 CHCHD10Q8WYQ3 142 aaPredicted RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 FRAT1Q92837 279 aaPredicted RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 EEF1AKMT3Q96AZ1 226 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 SLC25A38Q96DW6 304 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 NOL4LQ96MY1 436 aaPredicted RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 ZFP3Q96NJ6 502 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 F2RL3Q96RI0 385 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 HIST1H4GQ99525 98 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 ZNF251Q9BRH9 671 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 C7orf50Q9BRJ6 194 aaKnown RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 TIMM29Q9BSF4 260 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 SPZ1Q9BXG8 430 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 SLC38A1Q9H2H9 487 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 UBE2ZQ9H832 354 aaPredicted RBP3.87□□□□□ -1.79
LSM5-205ENST00000409952 SLC38A10Q9HBR0 1119 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 FGF22Q9HCT0 170 aa3.87□□□□□ -1.79
LSM5-205ENST00000409952 A0A0A6YYD5 115 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 A0A0G2JRQ6 117 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 ZNF816-ZNF321PA0A0X1KG74 233 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 A0A1B0GTI1 187 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 HACD1B0YJ81 288 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 F8VZ95 297 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 SMKR1H3BMG3 65 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 COCHO43405 550 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 DUS4LO95620 317 aaKnown RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 IGLL1P15814 213 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms