RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 UTF1Q5T230 341 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 REEP3Q6NUK4 255 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF546Q86UE3 836 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 IQCKQ8N0W5 287 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 NKAPP1Q8N9T2 125 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 OR2L2Q8NH16 312 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF564Q8TBZ8 553 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 GPX8Q8TED1 209 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 SMARCD2Q92925 531 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 NEIL2Q969S2 332 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 CCDC126Q96EE4 140 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF514Q96K75 400 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 HSFY1Q96LI6 401 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 FOXN4Q96NZ1 517 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 SLC29A1Q99808 456 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 GBA3Q9H227 469 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 TPK1Q9H3S4 243 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 RNF167Q9H6Y7 350 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 CWH43Q9H720 699 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 UGT1A10Q9HAW8 530 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 ADAP2Q9NPF8 381 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZDHHC4Q9NPG8 344 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 IL26Q9NPH9 171 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF275Q9NSD4 429 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 MRPL22Q9NWU5 206 aaKnown RBP3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 AHSPQ9NZD4 102 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 Q9UF83 564 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 GGA2Q9UJY4 613 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 LSM7Q9UK45 103 aaKnown RBP3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 MMP17Q9ULZ9 603 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 KCNE1BA0A087WTH5 132 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 KBTBD11-OT1A0A1B0GTJ5 212 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 GABRR3A8MPY1 467 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 GOLGA8KD6RF30 607 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 TEX46H3BTG2 121 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 ALDOBP05062 364 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 CCDC166P0CW27 439 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 MLNP12872 115 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 ATF6P18850 670 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 ATP6V1B2P21281 511 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 S100A1P23297 94 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 DCKP27707 260 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 RORAP35398 523 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 SLC26A3P40879 764 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 RGRP47804 291 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 ERFP50548 548 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 RAB14P61106 215 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 S100A12P80511 92 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 SLAQ13239 276 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 RGS21Q2M5E4 152 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 C15orf32Q32M92 178 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 BEX5Q5H9J7 111 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 C1orf100Q5SVJ3 147 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 C1orf146Q5VVC0 180 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 PLCXD3Q63HM9 321 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 TFAP2EQ6VUC0 442 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 FAM220AQ7Z4H9 259 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 LHFPL3Q86UP9 236 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF589Q86UQ0 364 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 SELENOHQ8IZQ5 122 aaKnown RBP3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 FAM86B1Q8N7N1 296 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF557Q8N988 423 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 OR51S1Q8NGJ8 323 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 UBA3Q8TBC4 463 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 DTX3LQ8TDB6 740 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 ACOT11Q8WXI4 607 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 TMEM246Q9BRR3 403 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 CALN1Q9BXU9 219 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 ISG20L2Q9H9L3 353 aaKnown RBP3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 TREM2Q9NZC2 230 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 CLN8Q9UBY8 286 aa3.61□□□□□ -1.83
HMGB1P13-201ENST00000406019 TMEM210A6NLX4 147 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 C12orf71A8MTZ7 269 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 ERVV-1B6SEH8 477 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 H0YJX3 145 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 PSMD11O00231 422 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 AIM2O14862 343 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 KMOO15229 486 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 MRPS12O15235 138 aaKnown RBP3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 BCL2L11O43521 198 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 HUS1O60921 280 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 SNAPINO95295 136 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 THY1P04216 161 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 TFPTP0C1Z6 253 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 COX5BP10606 129 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 MYL2P10916 166 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 SRMP19623 302 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 CD1BP29016 333 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 FOXN2P32314 431 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 GTF2H1P32780 548 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 SLC1A1P43005 524 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 RFX3P48380 749 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 CX3CR1P49238 355 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 MRPL19P49406 292 aaKnown RBP3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 ARRB1P49407 418 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 SERPINB8P50452 374 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 DAOAP59103 153 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 PSMC5P62195 406 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 RAB11AP62491 216 aa3.6□□□□□ -1.83
HMGB1P13-201ENST00000406019 SKP1P63208 163 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms