RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 OR6T1Q8NGN1 323 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 CCL17Q92583 94 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 MCHR2Q969V1 340 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 TRIM44Q96DX7 344 aaPredicted RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 MARS2Q96GW9 593 aaKnown RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF48Q96MX3 618 aaPredicted RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 MRPL13Q9BYD1 178 aaKnown RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 UNKLQ9H9P5 680 aaKnown RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 NANSQ9NR45 359 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 DCAF16Q9NXF7 216 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF69Q9UC07 566 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 PURGQ9UJV8 347 aaKnown RBP13□□□□□ -0.33
CHMP3-202ENST00000393773 SLC13A4Q9UKG4 626 aa13□□□□□ -0.33
CHMP3-202ENST00000393773 CPSF4LA6NMK7 179 aaKnown RBP12.99□□□□□ -0.33
CHMP3-202ENST00000393773 KPNA4O00629 521 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-202ENST00000393773 SPRY3O43610 288 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 MGRN1O60291 552 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 SERPINB7O75635 380 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 IGHV2-70P01814 119 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
CHMP3-202ENST00000393773 GPX2P18283 190 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 SLC6A2P23975 617 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 APLNRP35414 380 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 CLRN1P58418 232 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 PLP2Q04941 152 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 SPRNQ5BIV9 151 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 PABPC1L2AQ5JQF8 200 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 ENTPD8Q5MY95 495 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 C10orf128Q5T292 105 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 MBNL2Q5VZF2 373 aaKnown RBP12.99□□□□□ -0.33
CHMP3-202ENST00000393773 BLOC1S3Q6QNY0 202 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 PTOV1Q86YD1 416 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 LRRC18Q8N456 261 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 SMYD1Q8NB12 490 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 OR4D11Q8NGI4 311 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 GEMIN6Q8WXD5 167 aaKnown RBP12.99□□□□□ -0.33
CHMP3-202ENST00000393773 NABP1Q96AH0 204 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 POM121L2Q96KW2 1035 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 CPPED1Q9BRF8 314 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-202ENST00000393773 LRMDAQ9H2I8 198 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 MMP26Q9NRE1 261 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 UBAP1Q9NZ09 502 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 ANGPT4Q9Y264 503 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 POLR3KQ9Y2Y1 108 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-202ENST00000393773 UGT2A1Q9Y4X1 527 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 DOCK11Q5JSL3 2073 aa12.99□□□□□ -0.33
CHMP3-202ENST00000393773 LOC100509620A0A075B734 347 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 ICMTO60725 284 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 FOXH1O75593 365 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 IGHMP01871 453 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 OPN1SWP03999 348 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 CD55P08174 381 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 STOMP27105 288 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 ATP4BP51164 291 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF84P51523 738 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 MRPS34P82930 218 aaKnown RBP12.98□□□□□ -0.33
CHMP3-202ENST00000393773 HSF2Q03933 536 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 SLC3A1Q07837 685 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 DUSP7Q16829 419 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 RBMS3Q6XE24 437 aaKnown RBP12.98□□□□□ -0.33
CHMP3-202ENST00000393773 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 RBM45Q8IUH3 476 aaKnown RBP12.98□□□□□ -0.33
CHMP3-202ENST00000393773 BCL6BQ8N143 479 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-202ENST00000393773 ST7LQ8TDW4 575 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 ADAMTS16Q8TE57 1224 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 ASB10Q8WXI3 467 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 SPDL1Q96EA4 605 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 SLC19A3Q9BZV2 496 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 OR2J1Q9GZK6 312 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 NPHS2Q9NP85 383 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 PLEK2Q9NYT0 353 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 NUP50Q9UKX7 468 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 SLC7A7Q9UM01 511 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 CORO2BQ9UQ03 480 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 WNK1Q9H4A3 2382 aa12.98□□□□□ -0.33
CHMP3-202ENST00000393773 PLSCR5A0PG75 271 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 A8MXK9 166 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 CENPBD1B2RD01 187 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 TRAPPC2LH3BP13 241 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 SLC2A10O95528 541 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF12P17014 697 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF32P17041 273 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 RBMXP38159 391 aaKnown RBP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 STX1BP61266 288 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 SEC61A1P61619 476 aaKnown RBP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 RPL18Q07020 188 aaKnown RBP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF154Q13106 437 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 ZNF718Q3SXZ3 478 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 THEM4Q5T1C6 240 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 TTC33Q6PID6 262 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 EPGNQ6UW88 154 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 SLC25A40Q8TBP6 338 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 KLF14Q8TD94 323 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 NMD3Q96D46 503 aaKnown RBP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 MEPEQ9NQ76 525 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 CGGBP1Q9UFW8 167 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHMP3-202ENST00000393773 NPTNQ9Y639 398 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 USH1CQ9Y6N9 552 aa12.97□□□□□ -0.33
CHMP3-202ENST00000393773 V9GYY5 206 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms