RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 OR13C2Q8NGS9 318 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ZFAND1Q8TCF1 268 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 DTD1Q8TEA8 209 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ADIPOR1Q96A54 375 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 LURAP1Q96LR2 239 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 HOPXQ9BPY8 73 aaPredicted RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 ENKD1Q9H0I2 346 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 C1orf21Q9H246 121 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ELL3Q9HB65 397 aaPredicted RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 POFUT2Q9Y2G5 429 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 CHCHD2Q9Y6H1 151 aaPredicted RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 KIAA1549LQ6ZVL6 1849 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 EML6Q6ZMW3 1958 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 EFCAB9A8MZ26 197 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 NME2P1O60361 137 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 RAMP1O60894 148 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 GPX5O75715 221 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 LDLRP01130 860 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 S100A8P05109 93 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 SLC2A1P11166 492 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 IFNGR1P15260 489 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 NME2P22392 152 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ST3GAL3Q11203 375 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ALKBH1Q13686 389 aaKnown RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 TRAM2Q15035 370 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ETFDHQ16134 617 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 SNAPC1Q16533 368 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 KRT80Q6KB66 452 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ZNF813Q6ZN06 617 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ATG4DQ86TL0 474 aaPredicted RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 TIGD4Q8IY51 512 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 WDSUB1Q8N9V3 476 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 AQP11Q8NBQ7 271 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ACBD4Q8NC06 268 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 CLRN3Q8NCR9 226 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 PROKR2Q8NFJ6 384 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 OR4M2Q8NGB6 313 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 NEIL3Q8TAT5 605 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 PIGXQ8TBF5 258 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 SMAP2Q8WU79 429 aaPredicted RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 DUS3LQ96G46 650 aaKnown RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 RBP7Q96R05 134 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 OR5M11Q96RB7 305 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ZNF300Q96RE9 604 aaPredicted RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 TNFRSF13CQ96RJ3 184 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 EPYCQ99645 322 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 WFDC6Q9BQY6 131 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 NAA11Q9BSU3 229 aaPredicted RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 TEX12Q9BXU0 123 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 SHARPINQ9H0F6 387 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 POLR2J3Q9H1A7 115 aaKnown RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 ING1Q9UK53 422 aaPredicted RBP6.3□□□□□ -1.4
USP1-202ENST00000371146 LAMP3Q9UQV4 416 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ADAM18Q9Y3Q7 739 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 ATP23Q9Y6H3 246 aa6.3□□□□□ -1.4
USP1-202ENST00000371146 TBX1O43435 398 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SGCEO43556 437 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SMPD2O60906 423 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 NKX2-2O95096 273 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 ZNF205O95201 554 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 HLA-HP01893 362 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 GPIP06744 558 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 CDAP32320 146 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 CD79BP40259 229 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SLC1A3P43003 542 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 MS4A2Q01362 244 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 Q5BKY6 102 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 C1orf140Q5VVS0 124 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SLC25A24Q6NUK1 477 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 FAM122BQ7Z309 247 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 NOXA1Q86UR1 476 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 OR2V1Q8NHB1 315 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 BBS10Q8TAM1 723 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 LRTOMTQ8WZ04 291 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 COPS4Q9BT78 406 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 TSSK6Q9BXA6 273 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SPRY4Q9C004 299 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 FN3KQ9H479 309 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 ESRP2Q9H6T0 727 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 SAMD4AQ9UPU9 718 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 PLXNB3Q9ULL4 1909 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 OR6C76A6NM76 312 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 I3L521 148 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 GPR37O15354 613 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 NOL3O60936 208 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 WISP1O95388 367 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 PPP1R3DO95685 299 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 LGI1O95970 557 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 IGFBP1P08833 259 aaPredicted RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 FBXO45P0C2W1 286 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 NID1P14543 1247 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 CBR1P16152 277 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 S1PR1P21453 382 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 OPRL1P41146 370 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 CCR9P51686 369 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 UGT2B15P54855 530 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 CSNK2A1P68400 391 aaPredicted RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 IL5RAQ01344 420 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SP5Q6BEB4 398 aaPredicted RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 Q6ZPB1 254 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms