RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 FBLIM1Q8WUP2 373 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 SPIN2AQ99865 258 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 SPIN2BQ9BPZ2 258 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 C20orf24Q9BUV8 137 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 GAREM1Q9H706 876 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 SIRT3Q9NTG7 399 aaPredicted RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 CX3CR1P49238 355 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 SNRPNP63162 240 aaKnown RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 EXOSC6Q5RKV6 272 aaKnown RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 AADACL4Q5VUY2 407 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 LILRB2Q8N423 598 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 IL17RCQ8NAC3 791 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 FAM213BQ8TBF2 198 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 FBXL4Q9UKA2 621 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 COA3Q9Y2R0 106 aaPredicted RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 IL33O95760 270 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 BLVRBP30043 206 aaPredicted RBP13.55□□□□□ -0.24
RRP1B-201ENST00000340648 AFF3P51826 1226 aaKnown RBP13.55□□□□□ -0.24
RRP1B-201ENST00000340648 FCRL6Q6DN72 434 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 FAM86C1Q9NVL1 165 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 C1orf123Q9NWV4 160 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 SLC22A13Q9Y226 551 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 SULT2B1O00204 365 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 NSA2O95478 260 aaKnown RBP13.55□□□□□ -0.24
RRP1B-201ENST00000340648 CNR1P21554 472 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 OMGP23515 440 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 SDHAP31040 664 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 ACSM1Q08AH1 577 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 DOC2BQ14184 412 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 MARCH3Q86UD3 253 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 ANGPTL5Q86XS5 388 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 GPR137CQ8N3F9 429 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 KCNG3Q8TAE7 436 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 MR1Q95460 341 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 MCCC2Q9HCC0 563 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 UBR3Q6ZT12 1888 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 CDC42EP2O14613 210 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 SLC34A2O95436 690 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 IGHG1P01857 330 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 RAB5CP51148 216 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 CAMK2DQ13557 499 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 RUNX2Q13950 521 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 PELI1Q96FA3 418 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■■□□ 18.8
RRP1B-201ENST00000340648 NINQ8N4C6 2090 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 H0Y8X5 98 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 MGMTP16455 207 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 SERPINF1P36955 418 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 MAGEB1P43366 347 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 SELENOPP49908 381 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 KIRREL2Q6UWL6 708 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 NHLRC1Q6VVB1 395 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 NKAIN3Q8N8D7 197 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 LSMEM1Q8N8F7 131 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 RRNAD1Q96FB5 475 aaKnown RBP13.55□□□□□ -0.24
RRP1B-201ENST00000340648 NRTNQ99748 197 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 NIT2Q9NQR4 276 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 SIGLEC7Q9Y286 467 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 QSER1Q2KHR3 1735 aa13.55□□□□□ -0.24
RRP1B-201ENST00000340648 LOC107986453A0A1B0GWG9 222 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 NAT1P18440 290 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 HSD17B11Q8NBQ5 300 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 LCORQ96JN0 433 aaPredicted RBP13.54□□□□□ -0.24
RRP1B-201ENST00000340648 ABI3Q9P2A4 366 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 POU3F3P20264 500 aaPredicted RBP13.54□□□□□ -0.24
RRP1B-201ENST00000340648 GALP22466 123 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 HLXQ14774 488 aaPredicted RBP13.54□□□□□ -0.24
RRP1B-201ENST00000340648 PAN3Q58A45 887 aaKnown RBP13.54□□□□□ -0.24
RRP1B-201ENST00000340648 GLIPR1L1Q6UWM5 242 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 CLRN3Q8NCR9 226 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 OR11H7Q8NGC8 314 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 OR1S1Q8NH92 325 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 LRFN5Q96NI6 719 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 C12orf57Q99622 126 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 SCPEP1Q9HB40 452 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 PRDM7Q9NQW5 492 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 BLACEA4D250 179 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 SLC2A1P11166 492 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 FCGR2AP12318 317 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 CPT2P23786 658 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 PDSS1Q5T2R2 415 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 ADGRG3Q86Y34 549 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 NINJ1Q92982 152 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 YIPF5Q969M3 257 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 WDR34Q96EX3 536 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 ZC3HAV1LQ96H79 300 aaKnown RBP13.54□□□□□ -0.24
RRP1B-201ENST00000340648 NKX3-1Q99801 234 aaPredicted RBP13.54□□□□□ -0.24
RRP1B-201ENST00000340648 VN1R3Q9BXE9 311 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 BANF2Q9H503 90 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 PRAMEF27A3QJZ7 478 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 H3BUI4 141 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 CSNK1A1P48729 337 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 RPL18Q07020 188 aaKnown RBP13.54□□□□□ -0.24
RRP1B-201ENST00000340648 MPEG1Q2M385 716 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 NUDCD2Q8WVJ2 157 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 PATE1Q8WXA2 126 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 CMSS1Q9BQ75 279 aaKnown RBP13.54□□□□□ -0.24
RRP1B-201ENST00000340648 TAF9BQ9HBM6 251 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 CUTCQ9NTM9 273 aa13.54□□□□□ -0.24
RRP1B-201ENST00000340648 ZNF346Q9UL40 294 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms