RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 OR7A5Q15622 319 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 AWAT1Q58HT5 328 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 MESTQ5EB52 335 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 OR10K2Q6IF99 312 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ANGPTL8Q6UXH0 198 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SERPINA13PQ6UXR4 307 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 MTSS1LQ765P7 747 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 OLIG3Q7RTU3 272 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SPEM1Q8N4L4 309 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SLC22A18Q96BI1 424 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 R3HDM4Q96D70 268 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CPNE2Q96FN4 548 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 PRRC1Q96M27 445 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 RNF126Q9BV68 326 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ACTRT3Q9BYD9 372 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 OR51I1Q9H343 314 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 MED20Q9H944 212 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 IL26Q9NPH9 171 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 TRIM36Q9NQ86 728 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 DUSP22Q9NRW4 184 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CUTCQ9NTM9 273 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 GFOD1Q9NXC2 390 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 DOK5Q9P104 306 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ZDBF2Q9HCK1 2354 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 USP24Q9UPU5 2620 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SLC5A10A0PJK1 596 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 GGT3PA6NGU5 568 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF705EA8MWA4 302 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF879B4DU55 563 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 STMND1H3BQB6 276 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 GLSO94925 669 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 OR4E1P0C645 316 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF735P0CB33 412 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 NR2C1P13056 603 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 DAOP14920 347 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 XPAP23025 273 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ACVR1BP36896 505 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 YBEYP58557 167 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 TAS2R20P59543 309 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CLN3Q13286 438 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 DUSP5Q16690 384 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 PGGHGQ32M88 737 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 THEM4Q5T1C6 240 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ABLIM2Q6H8Q1 611 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 GRHL2Q6ISB3 625 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 FAM151BQ6UXP7 276 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CERS6Q6ZMG9 384 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 FCRLAQ7L513 359 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CPOQ8IVL8 374 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 LINC00471Q8N535 108 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SVIPQ8NHG7 77 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 RNF141Q8WVD5 230 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 PPP1R1CQ8WVI7 109 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SKA2Q8WVK7 121 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 RGP1Q92546 391 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 DIO2Q92813 273 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 C4orf36Q96KX1 117 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ELF4Q99607 663 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SELENOIQ9C0D9 397 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 TGIF2Q9GZN2 237 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 RHBGQ9H310 441 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 PRO1933Q9H354 126 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 PTGES2Q9H7Z7 377 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CHMP1AQ9HD42 196 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SEMA4GQ9NTN9 838 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ARL15Q9NXU5 204 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 PILRBQ9UKJ0 227 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 YLPM1P49750 1951 aaKnown RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CELSR2Q9HCU4 2923 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 BHLHE40O14503 412 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 MTX2O75431 263 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TBX6O95947 436 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GBAP04062 536 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 CD1AP06126 327 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 CD200P41217 278 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ACSM2AQ08AH3 577 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 KHDC3LQ587J8 217 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ACSM2BQ68CK6 577 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF620Q6ZNG0 422 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 RFLNAQ6ZTI6 216 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF664Q8N3J9 261 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 FAM24BQ8N5W8 94 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 CLEC1AQ8NC01 280 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 OR5R1Q8NH85 324 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 DUSP19Q8WTR2 217 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 NEIL2Q969S2 332 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GALNT14Q96FL9 552 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 FAM46AQ96IP4 442 aaKnown RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 FCRL4Q96PJ5 515 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 MENTQ9BUN1 341 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SNHG12Q9BXW3 62 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SLC6A16Q9GZN6 736 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 UBQLN3Q9H347 655 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 POFUT1Q9H488 388 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TREM1Q9NP99 234 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 POT1Q9NUX5 634 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 STOX2Q9P2F5 926 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 NCDNQ9UBB6 729 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 DNAJB11Q9UBS4 358 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GDF2Q9UK05 429 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms