RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ALG10Q5BKT4 473 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 FAM166AQ6J272 317 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 OR1S2Q8NGQ3 325 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 OR1J2Q8NGS2 313 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 OR6N2Q8NGY6 317 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 FLVCR1-AS1Q8TAF5 88 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 THAP6Q8TBB0 222 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 C3orf49Q96BT1 292 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 SCARF2Q96GP6 870 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 OR2M4Q96R27 311 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 APOOQ9BUR5 198 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 SRA1Q9HD15 236 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 A0A1B0GTH9 108 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ELOA3DA6NLF2 546 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF736B4DX44 427 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 F5H0A9 414 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 GPR31O00270 319 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 CD74P04233 296 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 PNMTP11086 282 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 BDKRB2P30411 391 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 PRMT2P55345 433 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 PDGFRLQ15198 375 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ELOA3BQ3SY89 546 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 DHRS7BQ6IAN0 325 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 VITQ6UXI7 678 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 LDLRAD3Q86YD5 345 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 TMEFF1Q8IYR6 380 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 PRSS35Q8N3Z0 413 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ELOA3Q8NG57 546 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 OR1M1Q8NGA1 313 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 OR51A4Q8NGJ6 313 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 PPP1R1CQ8WVI7 109 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 SLC25A28Q96A46 364 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ANKRD9Q96BM1 317 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 USB1Q9BQ65 265 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ZDHHC4Q9NPG8 344 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 MBD2Q9UBB5 411 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 TBC1D29Q9UFV1 150 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 SERINC4A6NH21 518 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 OR2AT4A6NND4 320 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 GRXCR1A8MXD5 290 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 F8W036 122 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 RDH16O75452 317 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 SLC25A12O75746 678 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 RENP00797 406 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 HLA-AP01891 365 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 APOC1P02654 83 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 LINC00271P0C7V0 271 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 RFC3P40938 356 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 CASRP41180 1078 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 FAM53BQ14153 422 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 MEF2DQ14814 521 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 BIVMQ86UB2 503 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 C10orf53Q8N6V4 93 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 LRRC75AQ8NAA5 344 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 INTS14Q96SY0 518 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ASF1BQ9NVP2 202 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 GRHPRQ9UBQ7 328 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF629Q9UEG4 869 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ERVK-19Q9WJR5 959 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 CARHSP1Q9Y2V2 147 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 MRPS2Q9Y399 296 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 OR5K4A6NMS3 321 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 H0YGG7 62 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 FGF16O43320 207 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 CSF2RAP15509 400 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 CCKBRP32239 447 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 PRKXP51817 358 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ARF3P61204 181 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 INPP5JQ15735 1006 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF74Q16587 644 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 C10orf91Q5T1B1 145 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 RAB12Q6IQ22 244 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 C3orf33Q6P1S2 294 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF813Q6ZN06 617 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 CA13Q8N1Q1 262 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 BPIFB2Q8N4F0 458 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 OR4N2Q8NGD1 307 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ARL11Q969Q4 196 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF587Q96SQ5 575 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 TINAGL1Q9GZM7 467 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 Q9N2J8 555 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 COA4Q9NYJ1 87 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 CKLFQ9UBR5 152 aa13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF346Q9UL40 294 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-220ENST00000635988 TICRRQ7Z2Z1 1910 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 IGKV1D-42A0A075B6H8 117 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 A0A1W2PP55 124 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 TVP23AA6NH52 213 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 M0QYG6 137 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 EIF1AYO14602 144 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 SNAPINO95295 136 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF735P0CB33 412 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 IGFALSP35858 605 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 PBX2P40425 430 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 KIR3DL2P43630 455 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 EIF1AXP47813 144 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 DCDP81605 110 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 DMWDQ09019 674 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 LRRC37A5PQ49AS3 106 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms