RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 EGFL7Q9UHF1 273 aa12.91□□□□□ -0.34
IFT20-216ENST00000588477 HAO1Q9UJM8 370 aa12.91□□□□□ -0.34
IFT20-216ENST00000588477 INSIG2Q9Y5U4 225 aa12.91□□□□□ -0.34
IFT20-216ENST00000588477 NPTNQ9Y639 398 aa12.91□□□□□ -0.34
IFT20-216ENST00000588477 PLSCR5A0PG75 271 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 CLDN34H7C241 214 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 BIRC5O15392 142 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 TPST1O60507 370 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 OR6A2O95222 327 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 GPANK1O95872 356 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 IGHMP01871 453 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 QDPRP09417 244 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 ETS2P15036 469 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 ZNF12P17014 697 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 EPHA3P29320 983 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 APLNRP35414 380 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 RBMXP38159 391 aaKnown RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 MPV17P39210 176 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 SEC61A1P61619 476 aaKnown RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 MELKQ14680 651 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 OR1Q1Q15612 314 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 SPRNQ5BIV9 151 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 TMEM255AQ5JRV8 349 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 SPATA46Q5T0L3 261 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 THEM4Q5T1C6 240 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 SPATC1Q76KD6 591 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 KIRREL3Q8IZU9 778 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 LRRC18Q8N456 261 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 CPEB3Q8NE35 698 aaKnown RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 IPCEF1Q8WWN9 437 aaPredicted RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 GEMIN6Q8WXD5 167 aaKnown RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 ITCHQ96J02 903 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 ROPN1BQ9BZX4 212 aaPredicted RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 EGLN1Q9GZT9 426 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 WDR55Q9H6Y2 383 aaPredicted RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 RMND5AQ9H871 391 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 ROPN1Q9HAT0 212 aaPredicted RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 TMEM27Q9HBJ8 222 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 NPHS2Q9NP85 383 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 A4GALTQ9NPC4 353 aa12.9□□□□□ -0.34
IFT20-216ENST00000588477 PDP1Q9P0J1 537 aaPredicted RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 SOX21Q9Y651 276 aaPredicted RBP12.9□□□□□ -0.34
IFT20-216ENST00000588477 IGHV3OR16-10A0A075B7F0 116 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 A0A0B4J2E0 115 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 A0A1B0GX12 115 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 ZSCAN5BA6NJL1 495 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 SLC22A3O75751 556 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 IGHV2-70P01814 119 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 BGNP21810 368 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 STX3Q13277 289 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 C6orf10Q5SRN2 563 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 C16orf87Q6PH81 154 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 DPPA2Q7Z7J5 298 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 OR52E2Q8NGJ4 325 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 SLC25A44Q96H78 314 aaPredicted RBP12.89□□□□□ -0.35
IFT20-216ENST00000588477 TMEM43Q9BTV4 400 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 PATZ1Q9HBE1 687 aaKnown RBP12.89□□□□□ -0.35
IFT20-216ENST00000588477 DCAF16Q9NXF7 216 aa12.89□□□□□ -0.35
IFT20-216ENST00000588477 TESQ9UGI8 421 aaKnown RBP12.89□□□□□ -0.35
IFT20-216ENST00000588477 POLR3KQ9Y2Y1 108 aaPredicted RBP12.89□□□□□ -0.35
IFT20-216ENST00000588477 CLIC1O00299 241 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 RNF13O43567 381 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 TPST2O60704 377 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 MT-ATP6P00846 226 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 KNG1P01042 644 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 PGA4P0DJD7 388 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 PGA3P0DJD8 388 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 IGHV4-38-2P0DP08 117 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 MTNR1AP48039 350 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 SLC6A9P48067 706 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 CDH12P55289 794 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 RGS8P57771 180 aaPredicted RBP12.88□□□□□ -0.35
IFT20-216ENST00000588477 HSF2Q03933 536 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 CEP85LQ5SZL2 805 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 DHRS4L2Q6PKH6 230 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 ZNF101Q8IZC7 436 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 KLHL36Q8N4N3 616 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 KIR3DL3Q8N743 410 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 NFKBIDQ8NI38 313 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 SLC25A40Q8TBP6 338 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 MARS2Q96GW9 593 aaKnown RBP12.88□□□□□ -0.35
IFT20-216ENST00000588477 CCT8L2Q96SF2 557 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 DIRC2Q96SL1 478 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 WFDC6Q9BQY6 131 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 TAS2R5Q9NYW4 299 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 MMP24Q9Y5R2 645 aa12.88□□□□□ -0.35
IFT20-216ENST00000588477 ADH4P08319 380 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 MMP7P09237 267 aaPredicted RBP12.87□□□□□ -0.35
IFT20-216ENST00000588477 BMP2P12643 396 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 STOMP27105 288 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 FADDQ13158 208 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 PABPC1L2AQ5JQF8 200 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 NXNQ6DKJ4 435 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 HIST2H2BDQ6DRA6 164 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 C17orf107Q6ZR85 190 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 PARP8Q8N3A8 854 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 SPICQ8N5J4 248 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 HIPK4Q8NE63 616 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 BHLHE22Q8NFJ8 381 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms