RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 KCTD18Q6PI47 426 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-222ENST00000555774 FAM198BQ6UWH4 519 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 TTLL10Q6ZVT0 673 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 OR10AC1Q8NH08 325 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 ASB13Q8WXK3 278 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 DAZLQ92904 295 aaKnown RBP12.19□□□□□ -0.46
SHMT2-222ENST00000555774 PTDSS2Q9BVG9 487 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 NUDT9Q9BW91 350 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 TXNIPQ9H3M7 391 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 A0A1W2PR77 199 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 OR6C65A6NJZ3 312 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 NPIPB7O75200 414 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 TMIGD3P0DMS9 266 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-222ENST00000555774 CD38P28907 300 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 PLCXD2Q0VAA5 305 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 MEP1BQ16820 701 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 OGFOD3Q6PK18 319 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 Q6ZS52 159 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 OR6N1Q8NGY5 312 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 ELF4Q99607 663 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-222ENST00000555774 TBL1XR1Q9BZK7 514 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 GSX2Q9BZM3 304 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 KIF25Q9UIL4 384 aa12.18□□□□□ -0.46
SHMT2-222ENST00000555774 HEATR5AQ86XA9 2040 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 IGLV1-36A0A0B4J1U3 117 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 IGHV1OR15-9A0A0B4J2B8 117 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 CIB4A0PJX0 185 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 C2CD4DB7Z1M9 353 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 SULT1C2O00338 296 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 DXOO77932 396 aaKnown RBP12.17□□□□□ -0.46
SHMT2-222ENST00000555774 RGS11O94810 467 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 OR6A2O95222 327 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 PDGFAP04085 211 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 AKAIN1P0CW23 69 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 PTHLHP12272 177 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 FSTP19883 344 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 SDHBP21912 280 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 POU3F4P49335 361 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 ACKR1Q16570 336 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 FAM166AQ6J272 317 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 MAMSTRQ6ZN01 415 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 SLC36A1Q7Z2H8 476 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 MARCH3Q86UD3 253 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 COMMD7Q86VX2 200 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 C9orf40Q8IXQ3 194 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 PRR22Q8IZ63 422 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 OR51A4Q8NGJ6 313 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 OR4C16Q8NGL9 310 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 OR6S1Q8NH40 331 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 CEP76Q8TAP6 659 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 STK35Q8TDR2 534 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 AMELYQ99218 206 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 DHRS9Q9BPW9 319 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 KLHDC3Q9BQ90 382 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 CHIAQ9BZP6 476 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 RTN4RQ9BZR6 473 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 WWTR1Q9GZV5 400 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 CA10Q9NS85 328 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 COPS7AQ9UBW8 275 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 NUP50Q9UKX7 468 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 TMED7-TICAM2A0A0A6YYA0 188 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 A8MVM7 634 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 PYCARD-AS1I3L0S3 204 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 SUSD5O60279 629 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 TOXO94900 526 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 HLA-DQA2P01906 255 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 MAOBP27338 520 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 OR1D4P47884 311 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 POU4F3Q15319 338 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-222ENST00000555774 C14orf28Q4W4Y0 310 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 GLT8D1Q68CQ7 371 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 FAAP20Q6NZ36 180 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 LRRC69Q6ZNQ3 347 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 SLC29A4Q7RTT9 530 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 FAM160A2Q8N612 972 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-222ENST00000555774 TSTD1Q8NFU3 115 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 OR51D1Q8NGF3 324 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 FAM3DQ96BQ1 224 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 GINS4Q9BRT9 223 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 CKLFQ9UBR5 152 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 DHDHQ9UQ10 334 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 TMED7Q9Y3B3 224 aa12.17□□□□□ -0.46
SHMT2-222ENST00000555774 COL5A1P20908 1838 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 HMSDA8MTL9 139 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 C11orf98E9PRG8 122 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 L7N2F9 121 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 CD2P06729 351 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 MELTFP08582 738 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 RRASP10301 218 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 CD37P11049 281 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 CRABP1P29762 137 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 CCKBRP32239 447 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 PRSS3P35030 304 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 NR0B1P51843 470 aaKnown RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 RIDAP52758 137 aaKnown RBP12.16□□□□□ -0.46
SHMT2-222ENST00000555774 ACTBP60709 375 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 ACTG1P63261 375 aa12.16□□□□□ -0.46
SHMT2-222ENST00000555774 MPPED2Q15777 294 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms