RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 DMC1Q14565 340 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SLC17A1Q14916 467 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 KHDRBS2Q5VWX1 349 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 LEKR1Q6ZMV7 388 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ZNF793Q6ZN11 406 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ZNF621Q6ZSS3 439 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 Q6ZVQ6 151 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SSX9Q7RTT3 188 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 HDDC2Q7Z4H3 204 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CENPSQ8N2Z9 138 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ARHGAP18Q8N392 663 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 OR2T33Q8NG76 320 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 OR1S2Q8NGQ3 325 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SPPL2AQ8TCT8 520 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CIDECQ96AQ7 238 aaPredicted RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 C7orf50Q9BRJ6 194 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 FAIM2Q9BWQ8 316 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 FAM49AQ9H0Q0 323 aaPredicted RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 HDHD2Q9H0R4 259 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CPVLQ9H3G5 476 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 RNF41Q9H4P4 317 aaPredicted RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 S100A14Q9HCY8 104 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 NUDT4Q9NZJ9 180 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 GOLGA8MH3BSY2 632 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SERPINA6P08185 405 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ZNF286BP0CG31 522 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 HLA-DMAP28067 261 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CCKBRP32239 447 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ACVR1BP36896 505 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 FEN1P39748 380 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 OPRD1P41143 372 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 RASSF2P50749 326 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 GPR18Q14330 331 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ZRSR1Q15695 479 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 MS4A18Q3C1V0 323 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 GTDC1Q4AE62 458 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 RD3Q7Z3Z2 195 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SLC26A11Q86WA9 606 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CDKL3Q8IVW4 592 aaPredicted RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 LRRC52Q8N7C0 313 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 TCEANCQ8N8B7 351 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 OR4C3Q8NH37 302 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ZPLD1Q8TCW7 415 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SORCS1Q8WY21 1168 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PSD2Q9BQI7 771 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PLEKHA1Q9HB21 404 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 DUS2Q9NX74 493 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 IKZF2Q9UKS7 526 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 AGO1Q9UL18 857 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 SLC7A7Q9UM01 511 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 TRRAPQ9Y4A5 3859 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ALMS1Q8TCU4 4167 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 KIR2DL5BA0A0G2JN68 375 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 KIR2DL5BA0A0G2JPC4 375 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 KRTAP9-6A0A140TA67 174 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 GOLGA8IPA6NC78 632 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 OR5H15A6NDH6 313 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 GOLGA6L9A6NEM1 432 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 EPHB6O15197 1021 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 EMC8O43402 210 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 CRTAPO75718 401 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 CEACAM4O75871 244 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 LYPD3O95274 346 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ETHE1O95571 254 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DCNP07585 359 aaKnown RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 PRDX3P30048 256 aaKnown RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 SLC1A4P43007 532 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 OR3A2P47893 321 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 GSSP48637 474 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 RPS27AP62979 156 aaKnown RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 GPS2Q13227 327 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 TPBGQ13641 420 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 NDUFAF6Q330K2 333 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 C22orf42Q6IC83 251 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 TMEM207Q6UWW9 146 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 Q6ZTK2 550 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ASRGL1Q7L266 308 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 NUFIP2Q7Z417 695 aaKnown RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 FAM19A1Q7Z5A9 133 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 RNF113BQ8IZP6 322 aaKnown RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 KIR2DL5AQ8N109 375 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 OR1L3Q8NH93 324 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 KIR2DL5BQ8NHK3 375 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 TM9SF4Q92544 642 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DNAJA3Q96EY1 480 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 RNF2Q99496 336 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ZNF747Q9BV97 191 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 NDEL1Q9GZM8 345 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 GBA3Q9H227 469 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 SLC38A1Q9H2H9 487 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ASB8Q9H765 288 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 LRIT2A6NDA9 550 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ZNF233A6NK53 670 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 K7EMT4 169 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 XRCC2O43543 280 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ZNF189O75820 626 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 OXSR1O95747 527 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 BMP15O95972 392 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 CTXN2P0C2S0 81 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms