RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ARPC2O15144 300 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 PTP4A3O75365 173 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 NDUFB2O95178 105 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 CD8AP01732 235 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 SOD3P08294 240 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 CECR9P0C854 216 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 COX5BP10606 129 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 IFI30P13284 250 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 ZNF35P13682 527 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 FPR3P25089 353 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 GLRXP35754 106 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 PPOXP50336 477 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 PCBD1P61457 104 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 VLDLRP98155 873 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 SLC36A2Q495M3 483 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 DNAL1Q4LDG9 190 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 HIKESHIQ53FT3 197 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 Q5PR19 223 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 ZNF813Q6ZN06 617 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 DPY19L2P2Q6ZN68 376 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.94□□□□□ -1.14
SMC1A-203ENST00000428014 FAM122BQ7Z309 247 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 NRMQ8IXM6 262 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 DEFB107AQ8IZN7 70 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 LRRC17Q8N6Y2 441 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 CLDN22Q8N7P3 220 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 RBM15BQ8NDT2 890 aaKnown RBP7.94□□□□□ -1.14
SMC1A-203ENST00000428014 OR1J2Q8NGS2 313 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 PFN4Q8NHR9 129 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 ZNF519Q8TB69 540 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 MCHR2Q969V1 340 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 DNAJA3Q96EY1 480 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 MMADHCQ9H3L0 296 aaPredicted RBP7.94□□□□□ -1.14
SMC1A-203ENST00000428014 CA10Q9NS85 328 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 ZNF224Q9NZL3 707 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 ITGB1BP2Q9UKP3 347 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 LAMP3Q9UQV4 416 aa7.94□□□□□ -1.14
SMC1A-203ENST00000428014 HIVEP2P31629 2446 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 TLN2Q9Y4G6 2542 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 SETD2Q9BYW2 2564 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 AQP12BA6NM10 295 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 EFCAB9A8MZ26 197 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 B2RBV5 119 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 M0R1B8 84 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 M0R3G1 203 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 TRMUO75648 421 aaKnown RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 FABP3P05413 133 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 QDPRP09417 244 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 T-ENOLP0DO92 83 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 SAGP10523 405 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 TNFRSF1BP20333 461 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 NR4A1P22736 598 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 SDHAP31040 664 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 AQP2P41181 271 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 GUCA1AP43080 201 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 OMPP47874 163 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 ZNF83P51522 516 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 ATP5J2P56134 94 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 CLRN1P58418 232 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 MRPS11P82912 194 aaKnown RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 IL1RL1Q01638 556 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 FOXD4Q12950 439 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 CAMK2DQ13557 499 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 C1orf94Q6P1W5 598 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 SLC25A47Q6Q0C1 308 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 TRPM8Q7Z2W7 1104 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 AQP12AQ8IXF9 295 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 OR4K5Q8NGD3 323 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 BCAS4Q8TDM0 211 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 ZNF837Q96EG3 531 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 EMC6Q9BV81 110 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 LRMDAQ9H2I8 198 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 PLK3Q9H4B4 646 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 TAS2R1Q9NYW7 299 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 VSX1Q9NZR4 365 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 CGGBP1Q9UFW8 167 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 EGFL7Q9UHF1 273 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 SLC7A8Q9UHI5 535 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 POU2F3Q9UKI9 436 aa7.93□□□□□ -1.14
SMC1A-203ENST00000428014 ZNF469Q96JG9 3925 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-203ENST00000428014 IGHV2OR16-5A0A0B4J2B6 119 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 C11orf98E9PRG8 122 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 KPNA4O00629 521 aaPredicted RBP7.92□□□□□ -1.14
SMC1A-203ENST00000428014 ATP5HO75947 161 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 GADD45GO95257 159 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 RAB36O95755 333 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 CST2P09228 141 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 MMP7P09237 267 aaPredicted RBP7.92□□□□□ -1.14
SMC1A-203ENST00000428014 SLC25A16P16260 332 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 MAKP20794 623 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 SERPINF1P36955 418 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 RASSF2P50749 326 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 RPS6KA3P51812 740 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 EFNA4P52798 201 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 CTXN1P60606 82 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 LSM6P62312 80 aaKnown RBP7.92□□□□□ -1.14
SMC1A-203ENST00000428014 RAB1AP62820 205 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 CBX1P83916 185 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 PLP2Q04941 152 aa7.92□□□□□ -1.14
SMC1A-203ENST00000428014 SF3A3Q12874 501 aaKnown RBP eCLIP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms