RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 H0YAE9 185 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 NME4O00746 187 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 RFXANKO14593 260 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CTNSO60931 367 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PSMG1O95456 288 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CPSF4O95639 269 aaKnown RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 GPR75O95800 540 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 C6orf47O95873 294 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 C1QCP02747 245 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ATP1B1P05026 303 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 FHP07954 510 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 KRT16P08779 473 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 C8orf89P0DMQ9 161 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CPMP14384 443 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 GPX2P18283 190 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CSNK2A2P19784 350 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 CPT2P23786 658 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PPP2R1BP30154 601 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 TLX1P31314 330 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 NKX2-1P43699 371 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 XCR1P46094 333 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CDK9P50750 372 aaKnown RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 GZMMP51124 257 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 NOVA1P51513 510 aaKnown RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 XKP51811 444 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 HSD17B7P56937 341 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PSME3P61289 254 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 KCNJ2P63252 427 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 BTG2P78543 158 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 FOLH1Q04609 750 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ACTN3Q08043 901 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 ACSM1Q08AH1 577 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 BIKQ13323 160 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ART3Q13508 389 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 VEZF1Q14119 521 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 SELPLGQ14242 412 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CAPRIN1Q14444 709 aaKnown RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 TOMM20Q15388 145 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 NKAIN1Q4KMZ8 207 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 VWA2Q5GFL6 755 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PIGGQ5H8A4 983 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 FHL5Q5TD97 284 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 SAXO2Q658L1 398 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 OR4A47Q6IF82 309 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 NANOGP8Q6NSW7 305 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 TMEM64Q6YI46 380 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 DGAT2L6Q6ZPD8 337 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ARPINQ7Z6K5 226 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 DHDDSQ86SQ9 333 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ANKRD46Q86W74 232 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 TMEM126BQ8IUX1 230 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 DEFB107AQ8IZN7 70 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 SPAG16Q8N0X2 631 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 C10orf111Q8N326 155 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PLPP5Q8NEB5 264 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 OR4K14Q8NGD5 310 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 OR9A2Q8NGT5 310 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 WDR36Q8NI36 951 aaKnown RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 ZNF675Q8TD23 568 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ZFP90Q8TF47 636 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 OR5P2Q8WZ92 322 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ZBED6CLQ96FA7 236 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 FAM71F1Q96KD3 344 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 AMDHD1Q96NU7 426 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ANKRD27Q96NW4 1050 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PANX1Q96RD7 426 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CTRCQ99895 268 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 SLC39A3Q9BRY0 314 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CLEC7AQ9BXN2 247 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 STRADBQ9C0K7 418 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 MMADHCQ9H3L0 296 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 AKIRIN1Q9H9L7 192 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 NANOGQ9H9S0 305 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 TPT1P8Q9HAU6 139 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PRTFDC1Q9NRG1 225 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 GSN-AS1Q9NRJ2 163 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 CMTM6Q9NX76 183 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 SLC39A1Q9NY26 324 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 TAS2R9Q9NYW1 312 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 AKAP7Q9P0M2 348 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 CTSFQ9UBX1 484 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ZNF282Q9UDV7 671 aaPredicted RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 CD300AQ9UGN4 299 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 ZNF639Q9UID6 485 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PRPF19Q9UMS4 504 aaKnown RBP3.62□□□□□ -1.83
CLK1-203ENST00000409769 SATB2Q9UPW6 733 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 TMED3Q9Y3Q3 217 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 MMACHCQ9Y4U1 282 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 WDR87Q6ZQQ6 2873 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 HEATR5AQ86XA9 2040 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 PRORSD1PA6NEY8 169 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 CFAP73A6NFT4 308 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 FAM220BPB1ANY3 271 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 H7C423 109 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 UPK1AO00322 258 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 NVLO15381 856 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 GYG2O15488 501 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 STK17BO94768 372 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 SORBS2O94875 1100 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 CLPSP04118 112 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms