RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 GPR143P51810 404 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 ALG11Q2TAA5 492 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 ZNF776Q68DI1 518 aaPredicted RBP12.59□□□□□ -0.39
NUP98-204ENST00000397004 LRRN1Q6UXK5 716 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 SLC38A3Q99624 504 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.59□□□□□ -0.39
NUP98-204ENST00000397004 APOC3P02656 99 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 ANXA2P07355 339 aaKnown RBP12.59□□□□□ -0.39
NUP98-204ENST00000397004 SLC25A1P53007 311 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 ZNF542PQ5EBM4 170 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 BEX5Q5H9J7 111 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 FAM109BQ6ICB4 259 aaPredicted RBP12.59□□□□□ -0.39
NUP98-204ENST00000397004 NDUFAF7Q7L592 441 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 OR6N2Q8NGY6 317 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 SEH1LQ96EE3 360 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 MRTO4Q9UKD2 239 aaKnown RBP12.59□□□□□ -0.39
NUP98-204ENST00000397004 IKZF2Q9UKS7 526 aa12.59□□□□□ -0.39
NUP98-204ENST00000397004 APBB3O95704 486 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 RPA2P15927 270 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 SDHAP31040 664 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 RAB38P57729 211 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 MFGE8Q08431 387 aaPredicted RBP12.58□□□□□ -0.39
NUP98-204ENST00000397004 SLC6A19Q695T7 634 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 OR10K2Q6IF99 312 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 ZNF550Q7Z398 422 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 WDFY1Q8IWB7 410 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 GPX8Q8TED1 209 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 RERGQ96A58 199 aaPredicted RBP12.58□□□□□ -0.39
NUP98-204ENST00000397004 C4orf45Q96LM5 186 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 RABL2AQ9UBK7 228 aaPredicted RBP12.58□□□□□ -0.39
NUP98-204ENST00000397004 RABL2BQ9UNT1 228 aa12.58□□□□□ -0.39
NUP98-204ENST00000397004 MRPS18BQ9Y676 258 aaKnown RBP12.58□□□□□ -0.39
NUP98-204ENST00000397004 URADA6NGE7 173 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 IFNA16P05015 189 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 LIPCP11150 499 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 TPMTP51580 245 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 ALG10Q5BKT4 473 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 JMJD6Q6NYC1 403 aaPredicted RBP12.58□□□□□ -0.4
NUP98-204ENST00000397004 CORO6Q6QEF8 472 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 PM20D2Q8IYS1 436 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 OR51A2Q8NGJ7 313 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 RSC1A1Q92681 617 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 TAAR8Q969N4 342 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 EFCAB7A8K855 629 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 CCSO14618 274 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 FNTBP49356 437 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 NFATC4Q14934 902 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 OR1J2Q8NGS2 313 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 ST8SIA2Q92186 375 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 CERS4Q9HA82 394 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 ERVK-19Q9WJR5 959 aa12.58□□□□□ -0.4
NUP98-204ENST00000397004 LMX1BO60663 402 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 OR4E1P0C645 316 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 TOMM34Q15785 309 aaPredicted RBP12.57□□□□□ -0.4
NUP98-204ENST00000397004 SLC22A6Q4U2R8 563 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 PARM1Q6UWI2 310 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 ZNF615Q8N8J6 731 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 AVL9Q8NBF6 648 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 OR1J4Q8NGS1 313 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 OR13C8Q8NGS7 320 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 FAM3DQ96BQ1 224 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 NPAS1Q99742 590 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 HRASLS2Q9NWW9 162 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 TDRD6O60522 2096 aaKnown RBP12.57□□□□□ -0.4
NUP98-204ENST00000397004 PLGP00747 810 aaPredicted RBP12.57□□□□□ -0.4
NUP98-204ENST00000397004 SKP2Q13309 424 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 C4orf46Q504U0 113 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 STEAP1BQ6NZ63 245 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 PDZD9Q8IXQ8 264 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 GABRG1Q8N1C3 465 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 ZNF676Q8N7Q3 588 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 TMEM138Q9NPI0 162 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 RNF222A6NCQ9 220 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 RFPL4AA6NLU0 287 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 RFPL4AL1F8VTS6 287 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 PLATP00750 562 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 CCKBRP32239 447 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 PRPS1P60891 318 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 ATPAF1Q5TC12 328 aaPredicted RBP12.57□□□□□ -0.4
NUP98-204ENST00000397004 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 SLC22A18ASQ8N1D0 253 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 OR4S1Q8NGB4 309 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 TNFAIP8L1Q8WVP5 186 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 LIPHQ8WWY8 451 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 IFT46Q9NQC8 304 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 RASL12Q9NYN1 266 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 PFDN2Q9UHV9 154 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 LAMP5Q9UJQ1 280 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 YBX2Q9Y2T7 364 aaKnown RBP12.57□□□□□ -0.4
NUP98-204ENST00000397004 RHBDD3Q9Y3P4 386 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 FREM3P0C091 2139 aa12.57□□□□□ -0.4
NUP98-204ENST00000397004 CFPP27918 469 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 MEP1BQ16820 701 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 METTL27Q8N6F8 245 aaPredicted RBP12.56□□□□□ -0.4
NUP98-204ENST00000397004 BPIFCQ8NFQ6 507 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
NUP98-204ENST00000397004 SLCO1B1Q9Y6L6 691 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 A0A1B0GTI1 187 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 LOC101059948A0A1B0GTJ6 334 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 TXNDC12O95881 172 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms