RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PNPP00491 289 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 C5AR1P21730 350 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 GDI1P31150 447 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 KIR3DL2P43630 455 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 DLX5P56178 289 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 FOXL2P58012 376 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 ENPP2Q13822 863 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 MOGAT2Q3SYC2 334 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 MESTQ5EB52 335 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 ARHGAP40Q5TG30 622 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF627Q7L945 461 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR51A2Q8NGJ7 313 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR1J2Q8NGS2 313 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR2G2Q8NGZ5 317 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 CTHRC1Q96CG8 243 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 ATG5Q9H1Y0 275 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 SAV1Q9H4B6 383 aaPredicted RBP9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM185BQ9H7F4 350 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 LAMP5Q9UJQ1 280 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 A0A087WUJ7 227 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 UBE2QL1A1L167 161 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 GGT3PA6NGU5 568 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR4C45A6NMZ5 311 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 FAM25EA8MYX2 175 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 ABHD16AO95870 558 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 CT45A8P0DMV1 189 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 CT45A9P0DMV2 189 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 CPN1P15169 458 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 ST6GAL1P15907 406 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 LUMP51884 338 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 DHODHQ02127 395 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 LGALS3BPQ08380 585 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 DMWDQ09019 674 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 RBMS2Q15434 407 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 CT45A2Q5DJT8 189 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 FAM122CQ6P4D5 195 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 BAIAP2L2Q6UXY1 529 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 DPY19L2P2Q6ZN68 376 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 FAM220AQ7Z4H9 259 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 KDM8Q8N371 416 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 CAMKVQ8NCB2 501 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 C16orf52Q8NHV5 167 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 FGF14Q92915 247 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 BADQ92934 168 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 CMBLQ96DG6 245 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 MYADMQ96S97 322 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 LPAR4Q99677 370 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 DCDC2BA2VCK2 349 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 H7C417 338 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 GPRIN2O60269 458 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 MPZL1O95297 269 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 FGF2P09038 288 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 HNRNPA1P09651 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 PPM1FP49593 454 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 EGR4Q05215 589 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 C2orf76Q3KRA6 126 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 ALG10Q5BKT4 473 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 LY6G6FQ5SQ64 297 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 TFAP2EQ6VUC0 442 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 CD163Q86VB7 1156 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR10K1Q8NGX5 313 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 BMFQ96LC9 184 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
CDC42SE1-207ENST00000540998 A0A087WV62 115 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 LOC101059948A0A1B0GTJ6 334 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 B3GALNT1O75752 331 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 TPMTP51580 245 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 RPL18Q07020 188 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 IL10RAQ13651 578 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 TOMM34Q15785 309 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 ITPRIPL2Q3MIP1 535 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 BCORP1Q8N888 145 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 PHOSPHO1Q8TCT1 267 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 LRRC46Q96FV0 321 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 VSTM2LQ96N03 204 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 TSPAN32Q96QS1 320 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC38A3Q99624 504 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 C14orf105Q9NVL8 296 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 AKAP7Q9P0M2 348 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 SESN1Q9Y6P5 492 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 SPAG17Q6Q759 2223 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 PCDH15Q96QU1 1955 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 NAP1L6A6NFF2 107 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF749O43361 778 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 IFNA16P05015 189 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 VEGFBP49765 207 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 MFGE8Q08431 387 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 PARM1Q6UWI2 310 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 OVCH2Q7RTZ1 564 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 MARCH3Q86UD3 253 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 PDZD9Q8IXQ8 264 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC25A36Q96CQ1 311 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 RBM18Q96H35 190 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLITRK2Q9H156 845 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 PRR13Q9NZ81 148 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLCO1B1Q9Y6L6 691 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms