RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ALG12Q9BV10 488 aa17.38■□□□□ 0.37
SNX25-204ENST00000506896 KATNB1Q9BVA0 655 aa17.38■□□□□ 0.37
SNX25-204ENST00000506896 SMURF2Q9HAU4 748 aa17.38■□□□□ 0.37
SNX25-204ENST00000506896 GRHPRQ9UBQ7 328 aa17.38■□□□□ 0.37
SNX25-204ENST00000506896 ZNF346Q9UL40 294 aaKnown RBP17.38■□□□□ 0.37
SNX25-204ENST00000506896 PLEKHA6Q9Y2H5 1048 aa17.38■□□□□ 0.37
SNX25-204ENST00000506896 A0A096LPE4 126 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 A0A1W2PPZ6 126 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 A0A1W2PR80 420 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 QDPRP09417 244 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 DNASE1P24855 282 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 ACVR1BP36896 505 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 GSSP48637 474 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 RUNX1T1Q06455 604 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 TSPAN31Q12999 210 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 C1orf146Q5VVC0 180 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 GPR139Q6DWJ6 353 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 PGBD2Q6P3X8 592 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 LRFN4Q6PJG9 635 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 SMARCD3Q6STE5 483 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 IGFN1Q86VF2 1251 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 PAPD5Q8NDF8 572 aaKnown RBP17.37■□□□□ 0.37
SNX25-204ENST00000506896 MCHR2Q969V1 340 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 RADILQ96JH8 1075 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 TSPAN32Q96QS1 320 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 KCNK17Q96T54 332 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 GPA33Q99795 319 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 FOXB1Q99853 325 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 NELFAQ9H3P2 528 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 NPAP1Q9NZP6 1156 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 MGAT4BQ9UQ53 548 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 RNF115Q9Y4L5 304 aa17.37■□□□□ 0.37
SNX25-204ENST00000506896 GNGT2O14610 69 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 DHHO43323 396 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 CIB2O75838 187 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 ATE1O95260 518 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 ZNF26P17031 533 aaPredicted RBP17.36■□□□□ 0.37
SNX25-204ENST00000506896 ZNF83P51522 516 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 ZNF133P52736 654 aaPredicted RBP17.36■□□□□ 0.37
SNX25-204ENST00000506896 BSPH1Q075Z2 132 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 MICAQ29983 383 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 NRN1LQ496H8 165 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 ZNF813Q6ZN06 617 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 DPY19L2P2Q6ZN68 376 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 ZNF704Q6ZNC4 412 aaPredicted RBP17.36■□□□□ 0.37
SNX25-204ENST00000506896 ARIH2OSQ8N7S6 290 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 FAM169BQ8N8A8 192 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 SYT14Q8NB59 555 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 ZNF519Q8TB69 540 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 FANK1Q8TC84 345 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 HDAC2Q92769 488 aaKnown RBP17.36■□□□□ 0.37
SNX25-204ENST00000506896 NRIP3Q9NQ35 241 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 U3KQV3 271 aa17.36■□□□□ 0.37
SNX25-204ENST00000506896 RAI1Q7Z5J4 1906 aaPredicted RBP17.35■□□□□ 0.37
SNX25-204ENST00000506896 DPRXA6NFQ7 191 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 XKRYO14609 159 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 AHCYL1O43865 530 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 MGRN1O60291 552 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 FKBP6O75344 327 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 RAF1P04049 648 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 APEHP13798 732 aaKnown RBP17.35■□□□□ 0.37
SNX25-204ENST00000506896 ZNF84P51523 738 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 RPS6KA3P51812 740 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 ERVK-25P63136 954 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 CD47Q08722 323 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 C3orf36Q3SXR2 165 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 THEM4Q5T1C6 240 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 C10orf128Q5T292 105 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 ZNF770Q6IQ21 691 aaPredicted RBP17.35■□□□□ 0.37
SNX25-204ENST00000506896 RPL13AP3Q6NVV1 102 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 FAM122BQ7Z309 247 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 OR9Q2Q8NGE9 314 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 NANOS1Q8WY41 292 aaKnown RBP17.35■□□□□ 0.37
SNX25-204ENST00000506896 ZNF570Q96NI8 536 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 RBP7Q96R05 134 aa17.35■□□□□ 0.37
SNX25-204ENST00000506896 ARRDC5A6NEK1 342 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 M0R1B8 84 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 DSCAMO60469 2012 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 FARS2O95363 451 aaKnown RBP17.34■□□□□ 0.37
SNX25-204ENST00000506896 B4GALT1P15291 398 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 CD40P25942 277 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 SDHAP31040 664 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 SLC6A6P31641 620 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 RFX4Q33E94 735 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 ADAM5Q6NVV9 412 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 THSD4Q6ZMP0 1018 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 NMD3Q96D46 503 aaKnown RBP17.34■□□□□ 0.37
SNX25-204ENST00000506896 OR52D1Q9H346 318 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 DENND2DQ9H6A0 471 aaPredicted RBP17.34■□□□□ 0.37
SNX25-204ENST00000506896 TMEM38BQ9NVV0 291 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 VNN3Q9NY84 501 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 CRNNQ9UBG3 495 aaPredicted RBP17.34■□□□□ 0.37
SNX25-204ENST00000506896 DNAJB9Q9UBS3 223 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 ADAM18Q9Y3Q7 739 aa17.34■□□□□ 0.37
SNX25-204ENST00000506896 ABCD4O14678 606 aa17.33■□□□□ 0.36
SNX25-204ENST00000506896 ARHGEF9O43307 516 aa17.33■□□□□ 0.36
SNX25-204ENST00000506896 SEC14L2O76054 403 aa17.33■□□□□ 0.36
SNX25-204ENST00000506896 OR8G3PP0DMU2 310 aa17.33■□□□□ 0.36
SNX25-204ENST00000506896 CBR1P16152 277 aa17.33■□□□□ 0.36
SNX25-204ENST00000506896 CD53P19397 219 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms