RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 MRPL13Q9BYD1 178 aaKnown RBP11.18□□□□□ -0.62
CLIP2-209ENST00000493166 LIME1Q9H400 295 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 YY1AP1Q9H869 796 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 GRHPRQ9UBQ7 328 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 ST6GALNAC2Q9UJ37 374 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF346Q9UL40 294 aaKnown RBP11.18□□□□□ -0.62
CLIP2-209ENST00000493166 U3KQV3 271 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 OTOGQ6ZRI0 2925 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 XKRYO14609 159 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 GNGT2O14610 69 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ABCD4O14678 606 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 DHHO43323 396 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 PTP4A3O75365 173 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 B4GALT1P15291 398 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF26P17031 533 aaPredicted RBP11.17□□□□□ -0.62
CLIP2-209ENST00000493166 PAX7P23759 505 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 PTAFRP25105 342 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 GSSP48637 474 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF84P51523 738 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 TSPAN31Q12999 210 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 HIST3H3Q16695 136 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 C1orf146Q5VVC0 180 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ADAM5Q6NVV9 412 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 C1orf94Q6P1W5 598 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 PGBD2Q6P3X8 592 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 LRFN4Q6PJG9 635 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 CCDC36Q8IYA8 594 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 PIAS4Q8N2W9 510 aaPredicted RBP11.17□□□□□ -0.62
CLIP2-209ENST00000493166 OR9Q2Q8NGE9 314 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF519Q8TB69 540 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 MCHR2Q969V1 340 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF570Q96NI8 536 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 GPX7Q96SL4 187 aaPredicted RBP11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ALG12Q9BV10 488 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 MOV10Q9HCE1 1003 aaKnown RBP11.17□□□□□ -0.62
CLIP2-209ENST00000493166 VNN3Q9NY84 501 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 IL20RAQ9UHF4 553 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 PLEKHA6Q9Y2H5 1048 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ADAM18Q9Y3Q7 739 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 MAP1AP78559 2803 aaPredicted RBP11.17□□□□□ -0.62
CLIP2-209ENST00000493166 CELSR1Q9NYQ6 3014 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ROS1P08922 2347 aa11.17□□□□□ -0.62
CLIP2-209ENST00000493166 ARHGEF9O43307 516 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 FKBP6O75344 327 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 ENTPD5O75356 428 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 CIB2O75838 187 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 RAF1P04049 648 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 CD79AP11912 226 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 DNASE1P24855 282 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 CD40P25942 277 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 SDHAP31040 664 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 FXYD6P3P58550 94 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 KEAP1Q14145 624 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 GK3PQ14409 553 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 THSD4Q6ZMP0 1018 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 DPY19L2P2Q6ZN68 376 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 ASRGL1Q7L266 308 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF627Q7L945 461 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 FAM122BQ7Z309 247 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 LURAP1LQ8IV03 231 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 ARIH2OSQ8N7S6 290 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 AQP11Q8NBQ7 271 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 KBTBD8Q8NFY9 601 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 FNDC8Q8TC99 324 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 NANOS1Q8WY41 292 aaKnown RBP11.16□□□□□ -0.62
CLIP2-209ENST00000493166 AKAP1Q92667 903 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLIP2-209ENST00000493166 NINJ1Q92982 152 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 Q96M85 177 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 RBP7Q96R05 134 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 KCNK17Q96T54 332 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 OR52D1Q9H346 318 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 CCM2LQ9NUG4 571 aaPredicted RBP11.16□□□□□ -0.62
CLIP2-209ENST00000493166 TMEM38BQ9NVV0 291 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 MGAT4BQ9UQ53 548 aa11.16□□□□□ -0.62
CLIP2-209ENST00000493166 PLCE1Q9P212 2302 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 IGHV1-18A0A0C4DH31 117 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 TEX13CA0A0J9YWL9 993 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 SOCS2O14508 198 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 HS3ST1O14792 307 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 FARS2O95363 451 aaKnown RBP11.15□□□□□ -0.62
CLIP2-209ENST00000493166 SLC2A10O95528 541 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 HLA-HP01893 362 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 OR8G3PP0DMU2 310 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 SLC6A6P31641 620 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 RPS6KA3P51812 740 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF133P52736 654 aaPredicted RBP11.15□□□□□ -0.62
CLIP2-209ENST00000493166 CDH11P55287 796 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 FMODQ06828 376 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 SPOCK1Q08629 439 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 KRR1Q13601 381 aaKnown RBP11.15□□□□□ -0.62
CLIP2-209ENST00000493166 MICAQ29983 383 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 RFX4Q33E94 735 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF672Q499Z4 452 aaPredicted RBP11.15□□□□□ -0.62
CLIP2-209ENST00000493166 MESTQ5EB52 335 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 THEM4Q5T1C6 240 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 C10orf128Q5T292 105 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 GPR139Q6DWJ6 353 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF770Q6IQ21 691 aaPredicted RBP11.15□□□□□ -0.62
CLIP2-209ENST00000493166 SLC22A25Q6T423 547 aa11.15□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF620Q6ZNG0 422 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms