RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 ELP5Q8TE02 316 aa8.98□□□□□ -0.97
ERCC3-208ENST00000491292 DMRTA2Q96SC8 542 aa8.98□□□□□ -0.97
ERCC3-208ENST00000491292 ACKR4Q9NPB9 350 aa8.98□□□□□ -0.97
ERCC3-208ENST00000491292 PRR13Q9NZ81 148 aa8.98□□□□□ -0.97
ERCC3-208ENST00000491292 PATJQ8NI35 1801 aa8.98□□□□□ -0.97
ERCC3-208ENST00000491292 SCN8AQ9UQD0 1980 aa8.98□□□□□ -0.97
ERCC3-208ENST00000491292 TRAV8-7A0A075B6U6 113 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 EDDM13A0A1B0GTR0 161 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 TSPAN11A1L157 253 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 GGT3PA6NGU5 568 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 SULT1C2O00338 296 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 ZIC2O95409 532 aaPredicted RBP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 HOXB5P09067 269 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 IL9P15248 144 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 CD80P33681 288 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 EBPQ15125 230 aaKnown RBP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 ZNF542PQ5EBM4 170 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 C12orf40Q86WS4 652 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 SAMD14Q8IZD0 417 aaPredicted RBP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 SLC39A11Q8N1S5 342 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 ZNF417Q8TAU3 575 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 NUBPLQ8TB37 319 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 FAM174AQ8TBP5 190 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 METTL21AQ8WXB1 218 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 TSACCQ96A04 125 aaPredicted RBP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 S100PBPQ96BU1 408 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 RSRP1Q9BUV0 290 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 SELENOIQ9C0D9 397 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 PIGMQ9H3S5 423 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 GAREM1Q9H706 876 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 CHMP1AQ9HD42 196 aaPredicted RBP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 DZANK1Q9NVP4 752 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 C2orf42Q9NWW7 574 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 A8MXK9 166 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 MED6O75586 246 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 TAS2R19P59542 299 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 EFNB1P98172 346 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 CLINT1Q14677 625 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 METRNLQ641Q3 311 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 OR52W1Q6IF63 320 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 NAA40Q86UY6 237 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 PRR22Q8IZ63 422 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 SLC25A44Q96H78 314 aaPredicted RBP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 PHB2Q99623 299 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 PBX4Q9BYU1 374 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 NPDC1Q9NQX5 325 aaPredicted RBP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 BRCA2P51587 3418 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 GBF1Q92538 1859 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 RFPL4AA6NLU0 287 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 RFPL4AL1F8VTS6 287 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 RDH16O75452 317 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 GLSO94925 669 aaPredicted RBP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 KNG1P01042 644 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 IL5P05113 134 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 GALP22466 123 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 CPT2P23786 658 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 OR3A2P47893 321 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 DIO1P49895 249 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 UBXN2BQ14CS0 331 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 FAM209BQ5JX69 171 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 TTLL10Q6ZVT0 673 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 PRSS41Q7RTY9 318 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 OR1M1Q8NGA1 313 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 OR14A16Q8NHC5 309 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 CAPNS2Q96L46 248 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 RNF208Q9H0X6 261 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.97□□□□□ -0.97
ERCC3-208ENST00000491292 NDRG3Q9UGV2 375 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 STEAP1Q9UHE8 339 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 ZNF337Q9Y3M9 751 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 CSAG2Q9Y5P2 127 aa8.97□□□□□ -0.97
ERCC3-208ENST00000491292 FGF17O60258 216 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 SRPX2O60687 465 aaPredicted RBP8.96□□□□□ -0.97
ERCC3-208ENST00000491292 ALOX12BO75342 701 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 ZNF254O75437 659 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 FABP1P07148 127 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 TPT1P13693 172 aaKnown RBP8.96□□□□□ -0.97
ERCC3-208ENST00000491292 P2RY2P41231 377 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 ZNF136P52737 540 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 NOGQ13253 232 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 NUDCD2Q8WVJ2 157 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 KISS1RQ969F8 398 aaPredicted RBP8.96□□□□□ -0.97
ERCC3-208ENST00000491292 CMBLQ96DG6 245 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 RGCCQ9H4X1 137 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 MSRAQ9UJ68 235 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 PURGQ9UJV8 347 aaKnown RBP8.96□□□□□ -0.97
ERCC3-208ENST00000491292 ZSWIM8A7E2V4 1837 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 CEP290O15078 2479 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 MED19A0JLT2 244 aaPredicted RBP8.96□□□□□ -0.97
ERCC3-208ENST00000491292 SULT1B1O43704 296 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 PTP4A3O75365 173 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 DAOP14920 347 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 SLC2A5P22732 501 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 CTNNB1P35222 781 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 MEP1BQ16820 701 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 PLEKHN1Q494U1 663 aaPredicted RBP8.96□□□□□ -0.97
ERCC3-208ENST00000491292 KIRREL2Q6UWL6 708 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 NUDT18Q6ZVK8 323 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 MARCH3Q86UD3 253 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 LDLRAD3Q86YD5 345 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms