RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 OR51Q1Q8NH59 317 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 OR14A16Q8NHC5 309 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 CNOT9Q92600 299 aaKnown RBP6.98□□□□□ -1.29
SNX13-208ENST00000482558 DAZLQ92904 295 aaKnown RBP6.98□□□□□ -1.29
SNX13-208ENST00000482558 OTULINQ96BN8 352 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 MMABQ96EY8 250 aaPredicted RBP6.98□□□□□ -1.29
SNX13-208ENST00000482558 TXNDC15Q96J42 360 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 MNTQ99583 582 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 TEAD3Q99594 435 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 MAP3K3Q99759 626 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 TMEM43Q9BTV4 400 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 CTDSP1Q9GZU7 261 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 HRH4Q9H3N8 390 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 HINT3Q9NQE9 182 aaKnown RBP6.98□□□□□ -1.29
SNX13-208ENST00000482558 KCNE5Q9UJ90 142 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 CDC42EP3Q9UKI2 254 aa6.98□□□□□ -1.29
SNX13-208ENST00000482558 LOC102723996A0A087X1L8 192 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 FABP12A6NFH5 140 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 FRG2CA6NGY1 282 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CASKO14936 926 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 PLPP2O43688 288 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 GMFGO60234 142 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 DNAJB6O75190 326 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 OR2B3O76000 313 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CH25HO95992 272 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 ADRA2AP08913 450 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 OR2T7P0C7T2 308 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 GKN3PP0CG01 181 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CT45A8P0DMV1 189 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CT45A9P0DMV2 189 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 MAKP20794 623 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CD1CP29017 333 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 TGFBR1P36897 503 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 PGDP52209 483 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 MAZP56270 477 aaKnown RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 IFITM3Q01628 133 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 TFF2Q03403 129 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 RIN1Q13671 783 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 GAMTQ14353 236 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 GGTLC2Q14390 218 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 PON3Q15166 354 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 ELAVL1Q15717 326 aaKnown RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 TBC1D25Q3MII6 688 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CCDC58Q4VC31 144 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 KLHL26Q53HC5 615 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CT45A2Q5DJT8 189 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 TMEM31Q5JXX7 168 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 C22orf42Q6IC83 251 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 WDR74Q6RFH5 385 aaPredicted RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 C5orf46Q6UWT4 87 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 GLDNQ6ZMI3 551 aaPredicted RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 DGLUCYQ7Z3D6 616 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 PRSS42Q7Z5A4 293 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 BCDIN3DQ7Z5W3 292 aaKnown RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 HMGN2P46Q86SG4 172 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 LHFPL3Q86UP9 236 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CDH26Q8IXH8 852 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 KDM8Q8N371 416 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 ARIH2OSQ8N7S6 290 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 ZNF614Q8N883 585 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 BCORP1Q8N888 145 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 ZNF615Q8N8J6 731 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 SLC37A3Q8NCC5 494 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 FAM71CQ8NEG0 241 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 OR51G2Q8NGK0 314 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 OR2T27Q8NH04 317 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 C16orf52Q8NHV5 167 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 NEIL3Q8TAT5 605 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 DNASE2BQ8WZ79 361 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 TM9SF4Q92544 642 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 TMEM131Q92545 1883 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 THRSPQ92748 146 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 EFHD2Q96C19 240 aaPredicted RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 GPX7Q96SL4 187 aaPredicted RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 DPYSL5Q9BPU6 564 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 KCNS3Q9BQ31 491 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 NEURL2Q9BR09 285 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 KATNB1Q9BVA0 655 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 ALG8Q9BVK2 526 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 STARD5Q9NSY2 213 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 CUTCQ9NTM9 273 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 SCN3AQ9NY46 2000 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 PAIP2BQ9ULR5 123 aaKnown RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 MOKQ9UQ07 419 aa6.97□□□□□ -1.29
SNX13-208ENST00000482558 UBE2J1Q9Y385 318 aaPredicted RBP6.97□□□□□ -1.29
SNX13-208ENST00000482558 CEP290O15078 2479 aa6.96□□□□□ -1.29
SNX13-208ENST00000482558 MKI67P46013 3256 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 A0A087WV48 116 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 A0A1B0GTQ1 180 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 A0A1W2PQD3 144 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 A0A1W2PQL4 384 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 HSPB2A8KAH6 182 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 C12orf71A8MTZ7 269 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 C17orf105B2RV13 164 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 GABRPO00591 440 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 TO15178 435 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 RNF13O43567 381 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 GPRIN2O60269 458 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 EIF4E2O60573 245 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 GATBO75879 557 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms