RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SMARCD3Q6STE5 483 aa17.91■□□□□ 0.46
VARS-224ENST00000479051 C20orf204Q6ZNR8 217 aa17.91■□□□□ 0.46
VARS-224ENST00000479051 ZNF627Q7L945 461 aa17.91■□□□□ 0.46
VARS-224ENST00000479051 FANK1Q8TC84 345 aa17.91■□□□□ 0.46
VARS-224ENST00000479051 MCHR2Q969V1 340 aa17.91■□□□□ 0.46
VARS-224ENST00000479051 GPX7Q96SL4 187 aaPredicted RBP17.91■□□□□ 0.46
VARS-224ENST00000479051 NELFAQ9H3P2 528 aa17.91■□□□□ 0.46
VARS-224ENST00000479051 TCRBV3S1A0A5B6 114 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 ABCD4O14678 606 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 FARS2O95363 451 aaKnown RBP17.9■□□□□ 0.46
VARS-224ENST00000479051 B4GALT1P15291 398 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 SLC6A6P31641 620 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 RPS6KA3P51812 740 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 TSPAN31Q12999 210 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 GPR139Q6DWJ6 353 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 PGBD2Q6P3X8 592 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 DPY19L2P2Q6ZN68 376 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
VARS-224ENST00000479051 ARIH2OSQ8N7S6 290 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 OR4C15Q8NGM1 316 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 ZNF519Q8TB69 540 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 HDAC2Q92769 488 aaKnown RBP17.9■□□□□ 0.46
VARS-224ENST00000479051 ZNF570Q96NI8 536 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 KCNK17Q96T54 332 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 KCNS3Q9BQ31 491 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 SMURF2Q9HAU4 748 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 U3KQV3 271 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 PRR14LQ5THK1 2151 aa17.9■□□□□ 0.46
VARS-224ENST00000479051 MAST4O15021 2626 aa17.89■□□□□ 0.46
VARS-224ENST00000479051 HS3ST1O14792 307 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 ARHGEF9O43307 516 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 PLAUP00749 431 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 OR8G3PP0DMU2 310 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 CD79AP11912 226 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 GSSP48637 474 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 MYBPC1Q00872 1141 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 MICAQ29983 383 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 C3orf36Q3SXR2 165 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 THEM4Q5T1C6 240 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 RPL13AP3Q6NVV1 102 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 ADAM5Q6NVV9 412 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 FAM169BQ8N8A8 192 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 AKAP1Q92667 903 aaKnown RBP eCLIP17.89■□□□□ 0.45
VARS-224ENST00000479051 GPA33Q99795 319 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 LIME1Q9H400 295 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 NRIP3Q9NQ35 241 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 TMEM38BQ9NVV0 291 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 POU2F3Q9UKI9 436 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 PLEKHA6Q9Y2H5 1048 aa17.89■□□□□ 0.45
VARS-224ENST00000479051 ANKRD17O75179 2603 aaKnown RBP17.89■□□□□ 0.45
VARS-224ENST00000479051 AHCYL1O43865 530 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 MGRN1O60291 552 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 FKBP6O75344 327 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 CBR1P16152 277 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 SDHAP31040 664 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 ARR3P36575 388 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 GUCA1AP43080 201 aaPredicted RBP17.88■□□□□ 0.45
VARS-224ENST00000479051 ZNF133P52736 654 aaPredicted RBP17.88■□□□□ 0.45
VARS-224ENST00000479051 TUBA1BP68363 451 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 TUBA4AP68366 448 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 RFX4Q33E94 735 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 NRN1LQ496H8 165 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 C10orf128Q5T292 105 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 SLC22A25Q6T423 547 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 TUBA1AQ71U36 451 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 DPPA2Q7Z7J5 298 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 SLC22A24Q8N4F4 322 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 AQP11Q8NBQ7 271 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 KBTBD8Q8NFY9 601 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 OR9Q2Q8NGE9 314 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 OR52L1Q8NGH7 329 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 FBXW5Q969U6 566 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 SLC38A2Q96QD8 506 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 OR52D1Q9H346 318 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 DENND2DQ9H6A0 471 aaPredicted RBP17.88■□□□□ 0.45
VARS-224ENST00000479051 CCM2LQ9NUG4 571 aaPredicted RBP17.88■□□□□ 0.45
VARS-224ENST00000479051 ADAM18Q9Y3Q7 739 aa17.88■□□□□ 0.45
VARS-224ENST00000479051 HRNRQ86YZ3 2850 aaPredicted RBP17.87■□□□□ 0.45
VARS-224ENST00000479051 SPG11Q96JI7 2443 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 TEX13CA0A0J9YWL9 993 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 E2F6O75461 281 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 UBL3O95164 117 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 APEHP13798 732 aaKnown RBP17.87■□□□□ 0.45
VARS-224ENST00000479051 ZNF26P17031 533 aaPredicted RBP17.87■□□□□ 0.45
VARS-224ENST00000479051 NPR2P20594 1047 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 GSTM3P21266 225 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 ERFP50548 548 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 CDH11P55287 796 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 PPP1R8Q12972 351 aaKnown RBP17.87■□□□□ 0.45
VARS-224ENST00000479051 KRR1Q13601 381 aaKnown RBP17.87■□□□□ 0.45
VARS-224ENST00000479051 ZNF672Q499Z4 452 aaPredicted RBP17.87■□□□□ 0.45
VARS-224ENST00000479051 THSD4Q6ZMP0 1018 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 ASRGL1Q7L266 308 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 FAM122BQ7Z309 247 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 ADCK1Q86TW2 530 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 ZNF611Q8N823 705 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 PAPD5Q8NDF8 572 aaKnown RBP17.87■□□□□ 0.45
VARS-224ENST00000479051 OR10G2Q8NGC3 310 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 Q96M85 177 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 KCNN2Q9H2S1 579 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms