RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 TMEM52BQ4KMG9 183 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 HES5Q5TA89 166 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF613Q6PF04 617 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ADAMTSL4Q6UY14 1074 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 MOB3CQ70IA8 216 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 LRRTM4Q86VH4 590 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 SAMD14Q8IZD0 417 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF843Q8N446 348 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 OR6N1Q8NGY5 312 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 OR14A16Q8NHC5 309 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 SYNPRQ8TBG9 265 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 SNX33Q8WV41 574 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 CDS1Q92903 461 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 WDR89Q96FK6 387 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-205ENST00000469550 OR1F2PQ96R84 312 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 SDF2Q99470 211 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 NRTNQ99748 197 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF350Q9GZX5 532 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ALX4Q9H161 411 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-205ENST00000469550 IFT22Q9H7X7 185 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 RASL12Q9NYN1 266 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 OR5V1Q9UGF6 321 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 SLC23A2Q9UGH3 650 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 NDRG3Q9UGV2 375 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF281Q9Y2X9 895 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 PCYT1BQ9Y5K3 369 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ASXL3Q9C0F0 2248 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 LOC400499M0QZD8 3231 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 FXYD6-FXYD2A0A087WZ82 144 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 A0A1W2PS29 197 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 IGLON5A6NGN9 336 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF98A6NK75 572 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 LMO7DNF2Z398 122 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 H7C417 338 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 GLSO94925 669 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-205ENST00000469550 PPP1R3DO95685 299 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 PRB1P04280 392 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 MELTFP08582 738 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 EDNRAP25101 427 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 AGTR1P30556 359 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 IGFALSP35858 605 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 TAS2R20P59543 309 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 CXADRP78310 365 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 LGALS3BPQ08380 585 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF542PQ5EBM4 170 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 OR7E24Q6IFN5 339 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 GUSBP11Q6P575 273 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 UQCC3Q6UW78 93 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 C17orf107Q6ZR85 190 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 GLB1L2Q8IW92 636 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 SLC35F2Q8IXU6 374 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF619Q8N2I2 560 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 OR2L13Q8N349 312 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 CYB561A3Q8NBI2 242 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 OR5M1Q8NGP8 315 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 KCNE4Q8WWG9 221 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 GCDHQ92947 438 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-205ENST00000469550 NAT6Q93015 286 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 LRRC46Q96FV0 321 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 RAB11FIP5Q9BXF6 653 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 SLC7A5P2Q9GIP4 190 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 MFFQ9GZY8 342 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 FXYD6Q9H0Q3 95 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 MTFP1Q9UDX5 166 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 FBXL4Q9UKA2 621 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 PLCL2Q9UPR0 1127 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 ENTPD2Q9Y5L3 495 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 A0A0D9SG52 128 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 A0A1W2PNU3 283 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 CDRT15L2A8MXV6 281 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 EIF4E2O60573 245 aaKnown RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 RBBP9O75884 186 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 CSF1P09603 554 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 MYF5P13349 255 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF35P13682 527 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 PLA2G2AP14555 144 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 CDK2P24941 298 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 RBM34P42696 430 aaKnown RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 RAB28P51157 221 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 CFHR1Q03591 330 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 STK11Q15831 433 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 NDUFAF6Q330K2 333 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 SLC35D3Q5M8T2 416 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 EXOSC6Q5RKV6 272 aaKnown RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 FAM111BQ6SJ93 734 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 LRRN1Q6UXK5 716 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 KRT77Q7Z794 578 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 SLC35F3Q8IY50 421 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 RFLNBQ8N5W9 214 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 OR7G2Q8NG99 324 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 OR2L8Q8NGY9 312 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 PHYHIPLQ96FC7 376 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 RBM18Q96H35 190 aaKnown RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 C10orf90Q96M02 699 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 SLC46A1Q96NT5 459 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 GINS4Q9BRT9 223 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF426Q9BUY5 554 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 LRRC61Q9BV99 259 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 NKX6-2Q9C056 277 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 SLITRK2Q9H156 845 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms