RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 LCORQ96JN0 433 aaPredicted RBP8.57□□□□□ -1.04
CUX1-206ENST00000437600 TSPAN32Q96QS1 320 aa8.57□□□□□ -1.04
CUX1-206ENST00000437600 RAB33BQ9H082 229 aa8.57□□□□□ -1.04
CUX1-206ENST00000437600 OCIAD1Q9NX40 245 aa8.57□□□□□ -1.04
CUX1-206ENST00000437600 KCNG2Q9UJ96 466 aa8.57□□□□□ -1.04
CUX1-206ENST00000437600 ICAM5Q9UMF0 924 aa8.57□□□□□ -1.04
CUX1-206ENST00000437600 VDAC3Q9Y277 283 aa8.57□□□□□ -1.04
CUX1-206ENST00000437600 B8ZZF3 427 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 SEC14L5O43304 696 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
CUX1-206ENST00000437600 SCO1O75880 301 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 CXCR1P25024 350 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 IL12BP29460 328 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 UQCRC1P31930 480 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 RORAP35398 523 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 TSPAN7P41732 249 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 FOXK1P85037 733 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 SERTAD2Q14140 314 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 HLA-DQA1Q5Y7H0 255 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 SLC23A3Q6PIS1 610 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 LINGO2Q7L985 606 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 TOMM5Q8N4H5 51 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 RNF166Q96A37 237 aaPredicted RBP8.56□□□□□ -1.04
CUX1-206ENST00000437600 CCDC74BQ96LY2 380 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 TBL1XR1Q9BZK7 514 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 LIN7BQ9HAP6 207 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 POLE3Q9NRF9 147 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 HAO2Q9NYQ3 351 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 MRM2Q9UI43 246 aaKnown RBP8.56□□□□□ -1.04
CUX1-206ENST00000437600 ZNF222Q9UK12 451 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 IGHV5-10-1A0A0J9YXX1 117 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 GMDSO60547 372 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 SLC19A2O60779 497 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 SLC43A1O75387 559 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 SCRG1O75711 98 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 CD14P08571 375 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 ABCD3P28288 659 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 BTCP35070 178 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 ADH7P40394 386 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 PPICP45877 212 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 BDH1Q02338 343 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 TMEM71Q6P5X7 295 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 CORO6Q6QEF8 472 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 GLRX5Q86SX6 157 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 MS4A15Q8N5U1 240 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 DUSP18Q8NEJ0 188 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 ADIPOR1Q96A54 375 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 PRODH2Q9UF12 536 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 SLC22A13Q9Y226 551 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 ATMQ13315 3056 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 TRAV8-7A0A075B6U6 113 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 OGG1O15527 345 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 FABP7O15540 132 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 WNT11O96014 354 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 HIST1H2ABP04908 130 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 CBX5P45973 191 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 PLCXD2Q0VAA5 305 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 TCF15Q12870 199 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 NR0B2Q15466 257 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 PXDC1Q5TGL8 231 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 WDR74Q6RFH5 385 aaPredicted RBP8.56□□□□□ -1.04
CUX1-206ENST00000437600 HIST3H2AQ7L7L0 130 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 FAM122BQ7Z309 247 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 WDFY1Q8IWB7 410 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 OR5M1Q8NGP8 315 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 HIST1H2ACQ93077 130 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 YIPF5Q969M3 257 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 CCDC120Q96HB5 630 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 ARL5BQ96KC2 179 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 MARVELD1Q9BSK0 173 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 JAM3Q9BX67 310 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 CACNG6Q9BXT2 260 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 ZNF768Q9H5H4 540 aaKnown RBP8.56□□□□□ -1.04
CUX1-206ENST00000437600 TMEM185BQ9H7F4 350 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 TAS2R5Q9NYW4 299 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 HSPB11Q9Y547 144 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 CACNG2Q9Y698 323 aa8.56□□□□□ -1.04
CUX1-206ENST00000437600 IGKV3D-11A0A0A0MRZ8 115 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 H3BML4 177 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 SLC16A7O60669 478 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 NOS1APO75052 506 aaPredicted RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 ZNF780AO75290 641 aaPredicted RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 GLCEO94923 617 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 SLC6A1P30531 599 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 FBXW4P57775 412 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 ACTC1P68032 377 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 ACTA1P68133 377 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 LGALS3BPQ08380 585 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 ZNF528Q3MIS6 628 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 YOD1Q5VVQ6 348 aaPredicted RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 PEAR1Q5VY43 1037 aaPredicted RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 COX15Q7KZN9 410 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 IFI44Q8TCB0 444 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 RBM14Q96PK6 669 aaKnown RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 SLCO1C1Q9NYB5 712 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 LAMP5Q9UJQ1 280 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 ADAM30Q9UKF2 790 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 TCRBV16S1A1N1A0A5B0 115 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 MASP2O00187 686 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 ORC5O43913 435 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms