RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 OR4C6Q8NH72 309 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TCTEX1D2Q8WW35 142 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 MRGPRFQ96AM1 343 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 STARD7Q9NQZ5 370 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 DUSP22Q9NRW4 184 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 DNAJB11Q9UBS4 358 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 NCOR2Q9Y618 2525 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 IFITM10A6NMD0 228 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 MBTPS2O43462 519 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 DUSP11O75319 330 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 POP4O95707 220 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 AGR2O95994 175 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 AVPR2P30518 371 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 REC114Q7Z4M0 266 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 SLC35F3Q8IY50 421 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 MMP21Q8N119 569 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 LILRA3Q8N6C8 439 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 NPEPL1Q8NDH3 523 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 SEH1LQ96EE3 360 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 MYADMQ96S97 322 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 FOXJ3Q9UPW0 622 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TMED3Q9Y3Q3 217 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 OR6C76A6NM76 312 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 DNAJB6O75190 326 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 AK1P00568 194 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 RPS2P15880 293 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 DPEP1P16444 411 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 MPIP34949 423 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 BUD31P41223 144 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 RBM34P42696 430 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 CX3CR1P49238 355 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 SDHAF4Q5VUM1 108 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 GLT8D1Q68CQ7 371 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 C18orf63Q68DL7 685 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 SLC24A5Q71RS6 500 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 C11orf96Q7Z7L8 435 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TMEM150AQ86TG1 271 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 OR13C5Q8NGS8 318 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CHMP1AQ9HD42 196 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 CYTL1Q9NRR1 136 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 SH2B3Q9UQQ2 575 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 A0A0A6YYD5 115 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CXorf65A6NEN9 183 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 F5H0A9 414 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 IFNA10P01566 189 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ASPHD2Q6ICH7 369 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 LCTLQ6UWM7 567 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 BIVMQ86UB2 503 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 GKN2Q86XP6 184 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ARRDC1Q8N5I2 433 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CLCC1Q96S66 551 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 MCHR1Q99705 422 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 GINS4Q9BRT9 223 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 AICDAQ9GZX7 198 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TOLLIPQ9H0E2 274 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 QRSL1Q9H0R6 528 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 ZNF69Q9UC07 566 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 A0A0B4J2A0 478 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TVP23AA6NH52 213 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 OR52A4PA6NMU1 304 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 C1QTNF3-AMACRE9PGA6 284 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 WNT11O96014 354 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ACHEP22303 614 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 LAP3P28838 519 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 GRK4P32298 578 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TAS2R38P59533 333 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TAS2R19P59542 299 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ERV3-1Q14264 604 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 NSUN5P2Q63ZY6 315 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 STAC2Q6ZMT1 411 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 DCXRQ7Z4W1 244 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TMCO2Q7Z6W1 182 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 NAA40Q86UY6 237 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TRAM1L1Q8N609 369 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 RNASEH2CQ8TDP1 164 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 SLC35G5Q96KT7 338 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TSPAN10Q9H1Z9 355 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 C20orf141Q9NUB4 165 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 SHPKQ9UHJ6 478 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 HDGFL3Q9Y3E1 203 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TRAV8-7A0A075B6U6 113 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CHURC1-FNTBB4DL54 471 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 MKRN2OSH3BPM6 223 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 PHOX2AO14813 284 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 EFSO43281 561 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 FCMRO60667 390 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 INHAP05111 366 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CLUP10909 449 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 PRG2P13727 222 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ADH7P40394 386 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ACTR1BP42025 376 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 PDX1P52945 283 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TEAD2Q15562 447 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ELAVL1Q15717 326 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 SLC35D3Q5M8T2 416 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 RPTNQ6XPR3 784 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 LINC00114Q6XXX2 140 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ZNF793Q6ZN11 406 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 STX12Q86Y82 276 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms