RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 COL28A1Q2UY09 1125 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 GSG1LQ6UXU4 331 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 CRIPAKQ8N1N5 446 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 OR1J2Q8NGS2 313 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 C16orf52Q8NHV5 167 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 KISS1RQ969F8 398 aaPredicted RBP7.59□□□□□ -1.19
SNX13-201ENST00000409076 WDR34Q96EX3 536 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 MYADMQ96S97 322 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 IFT46Q9NQC8 304 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 COPZ2Q9P299 210 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 EPHA6Q9UF33 1036 aa7.59□□□□□ -1.19
SNX13-201ENST00000409076 PTPRZ1P23471 2315 aaPredicted RBP7.59□□□□□ -1.2
SNX13-201ENST00000409076 hCG_1807616A0A1W2PRN6 198 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 ARRDC5A6NEK1 342 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 SDCBPO00560 298 aaPredicted RBP7.58□□□□□ -1.2
SNX13-201ENST00000409076 CLDN4O14493 209 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 DPM1O60762 260 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 LILRB3O75022 631 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 PMP2P02689 132 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 EN2P19622 333 aaPredicted RBP7.58□□□□□ -1.2
SNX13-201ENST00000409076 PRSS3P35030 304 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 SLC6A9P48067 706 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 ARFIP1P53367 373 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 C21orf58P58505 322 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 TAS2R43P59537 309 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 MC2RQ01718 297 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 UBE2NLQ5JXB2 153 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 C9orf50Q5SZB4 431 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 METTL11BQ5VVY1 283 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 ADAMTSL4Q6UY14 1074 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 OR13C3Q8NGS6 347 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 OR13C9Q8NGT0 318 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 PGLYRP3Q96LB9 341 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 SERINC2Q96SA4 455 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 CES1P1Q9UKY3 287 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 DHDHQ9UQ10 334 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 KIAA1671Q9BY89 1806 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 KANTRA0A1W2PQU2 76 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 B8ZZF3 427 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 SYT5O00445 386 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 F10P00742 488 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 HOXB5P09067 269 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 VSIG10L2P0DP72 767 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 TMEM44Q2T9K0 475 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 ARHGAP11BQ3KRB8 267 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 NKAPLQ5M9Q1 402 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 CD276Q5ZPR3 534 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 TSSK4Q6SA08 328 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 PDZD9Q8IXQ8 264 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 OR10R2Q8NGX6 335 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 VWCEQ96DN2 955 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 DPYSL5Q9BPU6 564 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 MED18Q9BUE0 208 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 EMC7Q9NPA0 242 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 B9D1Q9UPM9 204 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 CYB5AP00167 134 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 FAUP35544 74 aaKnown RBP7.58□□□□□ -1.2
SNX13-201ENST00000409076 DLSTP36957 453 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 EEF1A1P68104 462 aaKnown RBP7.58□□□□□ -1.2
SNX13-201ENST00000409076 TNK1Q13470 666 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 PDCD1Q15116 288 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 NR0B2Q15466 257 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 TMEM52BQ4KMG9 183 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 CMIPQ8IY22 773 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 BPIFB2Q8N4F0 458 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 SFXN5Q8TD22 340 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 ROBO4Q8WZ75 1007 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 SLC25A28Q96A46 364 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 KIAA1143Q96AT1 154 aaPredicted RBP7.58□□□□□ -1.2
SNX13-201ENST00000409076 ST6GALNAC5Q9BVH7 336 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 RAB11FIP5Q9BXF6 653 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.58□□□□□ -1.2
SNX13-201ENST00000409076 CAMK2AQ9UQM7 478 aa7.58□□□□□ -1.2
SNX13-201ENST00000409076 A0A0G2JK05 382 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 WISP1O95388 367 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 MPIG6BO95866 241 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 TRAPPC2P0DI81 140 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 TRAPPC2BP0DI82 140 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 THEGLP0DJG4 465 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 ZNF823P16415 610 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 C5AR1P21730 350 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 CD34P28906 385 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 S100A11P31949 105 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 CAPZA1P52907 286 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 ACTC1P68032 377 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 ACTA1P68133 377 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 TLE1Q04724 770 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 RPL18Q07020 188 aaKnown RBP7.57□□□□□ -1.2
SNX13-201ENST00000409076 DPTQ07507 201 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 GK2Q14410 553 aaPredicted RBP7.57□□□□□ -1.2
SNX13-201ENST00000409076 DUSP6Q16828 381 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 TMEM184AQ6ZMB5 413 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.57□□□□□ -1.2
SNX13-201ENST00000409076 SLC25A38Q96DW6 304 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 LRRC46Q96FV0 321 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 SCMH1Q96GD3 660 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 COX14Q96I36 57 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 MCOLN1Q9GZU1 580 aa7.57□□□□□ -1.2
SNX13-201ENST00000409076 NXF5Q9H1B4 397 aaKnown RBP7.57□□□□□ -1.2
SNX13-201ENST00000409076 EPHX3Q9H6B9 360 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms