RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 LYRM1O43325 122 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 DLX3O60479 287 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 TUSC2O75896 110 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 SERPINE2P07093 398 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 IL7RP16871 459 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 GUCA1AP43080 201 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 DAP3P51398 398 aaKnown RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 EMX1Q04741 257 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 ZNF415Q09FC8 603 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 B3GNTL1Q67FW5 361 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 NCEH1Q6PIU2 408 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 CENPVQ7Z7K6 275 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 TCEANCQ8N8B7 351 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 OR52B6Q8NGF0 335 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 TFAP2CQ92754 450 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 MRAP2Q96G30 205 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 LINC00615Q96LM1 132 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 ADAT1Q9BUB4 502 aaKnown RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 CDCA4Q9BXL8 241 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 CHST7Q9NS84 486 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 KAT6AQ92794 2004 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 MAP1LC3B2A6NCE7 125 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 TRAF3IP2O43734 574 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 CDC14BO60729 498 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 FGF2P09038 288 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 MTNR1AP48039 350 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 SLC37A1P57057 533 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 GNG3P63215 75 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 N4BP2L1Q5TBK1 243 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 GRHL2Q6ISB3 625 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 ABHD15Q6UXT9 468 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 DLK2Q6UY11 383 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 FAM219AQ8IW50 185 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 CCDC71LQ8N9Z2 235 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 LYPD6BQ8NI32 183 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 MRPL38Q96DV4 380 aaKnown RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 RNF157Q96PX1 679 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 MAP1LC3BQ9GZQ8 125 aa8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 C11orf54Q9H0W9 315 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 ZNF346Q9UL40 294 aaKnown RBP8.17□□□□□ -1.1
CTDSPL-201ENST00000273179 COL11A2P13942 1736 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 KIAA1324LA8MWY0 1029 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 F8WDY8 70 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 CEACAM4O75871 244 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 RPS16P62249 146 aaKnown RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 DYNLT1P63172 113 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 PIGFQ07326 219 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OLIG2Q13516 323 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 NUFIP2Q7Z417 695 aaKnown RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 IRF2BP2Q7Z5L9 587 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 DCBLD1Q8N8Z6 715 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR1L4Q8NGR5 311 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 FEZF2Q8TBJ5 459 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 TMEM18Q96B42 140 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 TMEM159Q96B96 161 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 CRLS1Q9UJA2 301 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 RNF6Q9Y252 685 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 UBIAD1Q9Y5Z9 338 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 V9GYY9 64 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 DHRS12A0PJE2 317 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 ANKRD20A5PA0PJZ0 165 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 GABARAPO95166 117 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 LSM8O95777 96 aaKnown RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 NPY1RP25929 384 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 POLR2HP52434 150 aaKnown RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 TMEM33P57088 247 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 MS4A2Q01362 244 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 SCAPQ12770 1279 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 AIMP2Q13155 320 aaKnown RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 DPYSL3Q14195 570 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 EMC4Q5J8M3 183 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 RNF149Q8NC42 400 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR6N2Q8NGY6 317 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 TMEM209Q96SK2 561 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 RIMS3Q9UJD0 308 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 FZD4Q9ULV1 537 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 DLEC1Q9Y238 1755 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 A0A087WZ62 844 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 TBC1D3BA6NDS4 549 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 ACRP10323 421 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 PSMB10P40306 273 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 TAF6P49848 677 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 WNT7BP56706 349 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR10A3P58181 314 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 PSMA6P60900 246 aaKnown RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 CXCL9Q07325 125 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 CDH18Q13634 790 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 FAM78BQ5VT40 261 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 TBC1D3GQ6DHY5 549 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR1N2Q8NGR9 330 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR2Y1Q8NGV0 311 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR5R1Q8NH85 324 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR14L1PQ8NHC6 308 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 PRR11Q96HE9 360 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 SIGLEC11Q96RL6 698 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR11A1Q9GZK7 315 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 OR2D2Q9H210 308 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 MED9Q9NWA0 146 aa8.16□□□□□ -1.1
CTDSPL-201ENST00000273179 TAS2R8Q9NYW2 309 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms