RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 VIMP08670 466 aaKnown RBP12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 ADRA2AP08913 450 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 UMPSP11172 480 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZNF14P17017 642 aaPredicted RBP12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 SRD5A1P18405 259 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 CD247P20963 164 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 PCGF2P35227 344 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 GIPRP48546 466 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 GALK2Q01415 458 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZP4Q12836 540 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZNF74Q16587 644 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 GKAP1Q5VSY0 366 aaPredicted RBP12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 IL17RELQ6ZVW7 336 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 HIST3H2AQ7L7L0 130 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 HDXQ7Z353 690 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 OR4D11Q8NGI4 311 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 OR6X1Q8NH79 312 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 UBASH3BQ8TF42 649 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 HIST1H2ACQ93077 130 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 MPP4Q96JB8 637 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZNF75AQ96N20 296 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 TPK1Q9H3S4 243 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 DENND2DQ9H6A0 471 aaPredicted RBP12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 GLTPQ9NZD2 209 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZNF224Q9NZL3 707 aa12.89□□□□□ -0.35
RN7SL560P-201ENST00000577943 LRP5LA4QPB2 252 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 THY1P04216 161 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZNF35P13682 527 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 HNF1AP20823 631 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 GIFP27352 417 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 MELKQ14680 651 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 RAB39AQ14964 217 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 VMACQ2NL98 169 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 FAM120AOSQ5T036 256 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 PIWIL3Q7Z3Z3 882 aaKnown RBP12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 RASSF5Q8WWW0 418 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 TMEM54Q969K7 222 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZNF566Q969W8 418 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 TAMM41Q96BW9 452 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 SIKE1Q9BRV8 207 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 MRPL37Q9BZE1 423 aaKnown RBP12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 FBXL3Q9UKT7 428 aa12.88□□□□□ -0.35
RN7SL560P-201ENST00000577943 M0R233 179 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 SYNGR3O43761 229 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 ENTPD5O75356 428 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 LYPD3O95274 346 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 BCL10O95999 233 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 LSP1P33241 339 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 GLRXP35754 106 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 EVX1P49640 407 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 CHN2P52757 468 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 RPS23P62266 143 aaKnown RBP12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 CYLC2Q14093 348 aaPredicted RBP12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 MSMPQ1L6U9 139 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 METTL21CQ5VZV1 264 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 NANOGP8Q6NSW7 305 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 TSPYL5Q86VY4 417 aaPredicted RBP12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 SKA3Q8IX90 412 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 SLC22A24Q8N4F4 322 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 LRRC17Q8N6Y2 441 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 SLC25A44Q96H78 314 aaPredicted RBP12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 SYT3Q9BQG1 590 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 SLC19A3Q9BZV2 496 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 PCDHAC1Q9H158 963 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 NANOGQ9H9S0 305 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 ARGLU1Q9NWB6 273 aaPredicted RBP12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 REV1Q9UBZ9 1251 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 ZNF229Q9UJW7 825 aa12.87□□□□□ -0.35
RN7SL560P-201ENST00000577943 BLOC1S5-TXNDC5H3BN57 136 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 FBP2O00757 339 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 DHHO43323 396 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 FARS2O95363 451 aaKnown RBP12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 IGFBP1P08833 259 aaPredicted RBP12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 TACSTD2P09758 323 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 ASAH2BP0C7U1 165 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 PATE4P0C8F1 98 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 OR8G3PP0DMU2 310 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 APEX1P27695 318 aaKnown RBP12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 GZMMP51124 257 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 CCDC80Q76M96 950 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 NANOGNBQ7Z5D8 188 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 FGFBP3Q8TAT2 258 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 SNX18Q96RF0 628 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 SH3GL1Q99961 368 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 ECSITQ9BQ95 431 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 SOX7Q9BT81 388 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 MS4A5Q9H3V2 200 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 RNF121Q9H920 327 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 VIPAS39Q9H9C1 493 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 SLC7A8Q9UHI5 535 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 FZR1Q9UM11 496 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 SH3GLB1Q9Y371 365 aa12.86□□□□□ -0.35
RN7SL560P-201ENST00000577943 LYNX1G3V0Z9 82 aa12.85□□□□□ -0.35
RN7SL560P-201ENST00000577943 LILRA1O75019 489 aa12.85□□□□□ -0.35
RN7SL560P-201ENST00000577943 IGHG1P01857 330 aa12.85□□□□□ -0.35
RN7SL560P-201ENST00000577943 SERPINA5P05154 406 aa12.85□□□□□ -0.35
RN7SL560P-201ENST00000577943 QDPRP09417 244 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms