RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	RRNAD1	Q96FB5	475 aa	Known RBP	11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	ANKRD19P	Q9H560	264 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC6A20	Q9NP91	592 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	LRFN1	Q9P244	771 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	KLHL21	Q9UJP4	597 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	DKKL1	Q9UK85	242 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	POLH	Q9Y253	713 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	IGKV1-8	A0A0C4DH67	115 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	KIR2DS5	A0A0G2JLQ3	304 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029		A0A0G2JNG1	304 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	KIR2DS3	K7RE56	304 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	SGCE	O43556	437 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	TFF2	Q03403	129 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	KIR2DS5	Q14953	304 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	UNQ6126/PRO20091	Q6UXV3	157 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	OR13C2	Q8NGS9	318 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	GPR148	Q8TDV2	347 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	DVL3	Q92997	716 aa	Predicted RBP	11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	MS4A4E	Q96PG1	132 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	DCLRE1C	Q96SD1	692 aa	Known RBP	11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	UBQLN3	Q9H347	655 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	ISG20L2	Q9H9L3	353 aa	Known RBP	11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	PPP4R1L	Q9P1A2	415 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	RNF215	Q9Y6U7	377 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	SCO1	O75880	301 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	DBH	P09172	617 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF705D	P0CH99	300 aa	Predicted RBP	11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF705B	P0CI00	300 aa	Predicted RBP	11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ELK1	P19419	428 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	SDHB	P21912	280 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	RPS10	P46783	165 aa	Known RBP	11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	PLP2	Q04941	152 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	FAM189A2	Q15884	450 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	OR56B2P	Q8NGI1	322 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	IL1F10	Q8WWZ1	152 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	SERINC2	Q96SA4	455 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	B3GAT2	Q9NPZ5	323 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	MMP17	Q9ULZ9	603 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	CIB4	A0PJX0	185 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	FAM221B	A6H8Z2	402 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	HLA-A	P01891	365 aa	Known RBP	11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	LCAT	P04180	440 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	CHRNB1	P11230	501 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC35F2	Q8IXU6	374 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	OR7G1	Q8NGA0	311 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	GHSR	Q92847	366 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	PHB2	Q99623	299 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	GON7	Q9BXV9	100 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	CDCP1	Q9H5V8	836 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	C2orf42	Q9NWW7	574 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	IL20	Q9NYY1	176 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029		V9GY05	133 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	TMEM72	A0PK05	275 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	EPOP	A6NHQ4	379 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	HR	O43593	1189 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ICMT	O60725	284 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	FZD7	O75084	574 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	SERPINA5	P05154	406 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ARSB	P15848	533 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	DLX5	P56178	289 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ACY1	Q03154	408 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	TLE3	Q04726	772 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	DBP	Q10586	325 aa	Predicted RBP	11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	TRAM1	Q15629	374 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	OTP	Q5XKR4	325 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC18B1	Q6NT16	456 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	TMEM92	Q6UXU6	159 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	MEPCE	Q7L2J0	689 aa	Known RBP	11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	KANSL1	Q7Z3B3	1105 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	FAM109A	Q8N4B1	249 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	SIRT6	Q8N6T7	355 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ZFPM2	Q8WW38	1151 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ATOH1	Q92858	354 aa	Predicted RBP	11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	ARL11	Q969Q4	196 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	NCDN	Q9UBB6	729 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	CBLC	Q9ULV8	474 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC7A11	Q9UPY5	501 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	TTC28	Q96AY4	2481 aa		11.28	□□□□□ -0.6
TMPO-212	ENST00000556029	C4orf51	C9J302	202 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	SRP9	P49458	86 aa	Known RBP	11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	VEGFC	P49767	419 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	KDM8	Q8N371	416 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF511	Q8NB15	262 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	OR52R1	Q8NGF1	315 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	OR51T1	Q8NGJ9	327 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	ZBTB8A	Q96BR9	441 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	OR5B12	Q96R08	314 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	INTS14	Q96SY0	518 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	GCM1	Q9NP62	436 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	TAS2R8	Q9NYW2	309 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	ENTPD2	Q9Y5L3	495 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	OBSL1	O75147	1896 aa		11.27	□□□□□ -0.6
TMPO-212	ENST00000556029	FBL	P22087	321 aa	Known RBP	11.27	□□□□□ -0.61
TMPO-212	ENST00000556029	GABRR1	P24046	479 aa		11.27	□□□□□ -0.61
TMPO-212	ENST00000556029	RRAS2	P62070	204 aa	Predicted RBP	11.27	□□□□□ -0.61
TMPO-212	ENST00000556029	FGL1	Q08830	312 aa		11.27	□□□□□ -0.61
TMPO-212	ENST00000556029	ZIC1	Q15915	447 aa		11.27	□□□□□ -0.61
TMPO-212	ENST00000556029	MFSD12	Q6NUT3	480 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms