RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 RNF13O43567 381 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 UBL3O95164 117 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 RAB36O95755 333 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 NPPAP01160 153 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 APEHP13798 732 aaKnown RBP10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 DAOP14920 347 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 B4GALT1P15291 398 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 CD247P20963 164 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 PTDSS1P48651 473 aaKnown RBP10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 EVX1P49640 407 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 RAB1AP62820 205 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 SNTB2Q13425 540 aaKnown RBP10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 NPTX1Q15818 432 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF74Q16587 644 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 FAM166AQ6J272 317 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 KRT80Q6KB66 452 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 NANOGP8Q6NSW7 305 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 SLC35D2Q76EJ3 337 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 RBM45Q8IUH3 476 aaKnown RBP10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 SVOPLQ8N434 492 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 VANGL1Q8TAA9 524 aaPredicted RBP10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF566Q969W8 418 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 ECSITQ9BQ95 431 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 PCDHAC1Q9H158 963 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 NANOGQ9H9S0 305 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 DYNLRB1Q9NP97 96 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 TAS2R5Q9NYW4 299 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 GLTPQ9NZD2 209 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF229Q9UJW7 825 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 KCNS2Q9ULS6 477 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 SLC7A7Q9UM01 511 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 TMEM129A0AVI4 362 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 STAMBPO95630 424 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 UMPSP11172 480 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF35P13682 527 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF14P17017 642 aaPredicted RBP10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF23P17027 643 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 LSP1P33241 339 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 GLRXP35754 106 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 GIPRP48546 466 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 GALK2Q01415 458 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 VMACQ2NL98 169 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 MMEL1Q495T6 779 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 GKAP1Q5VSY0 366 aaPredicted RBP10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 WDR88Q6ZMY6 472 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 CCDC80Q76M96 950 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 TMEM54Q969K7 222 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 TAMM41Q96BW9 452 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 SLC25A44Q96H78 314 aaPredicted RBP10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 MS4A5Q9H3V2 200 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 BAG5Q9UL15 447 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 SH3GLB1Q9Y371 365 aa10.72□□□□□ -0.69
CAPRIN1-213ENST00000533562 IGHV4-61A0A0C4DH41 118 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 BLOC1S5-TXNDC5H3BN57 136 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 KPNA4O00629 521 aaPredicted RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 SYNGR3O43761 229 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 LYPD3O95274 346 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 FARS2O95363 451 aaKnown RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 BCL10O95999 233 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 TGFAP01135 160 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 IFNA14P01570 189 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 THY1P04216 161 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 ADRA2AP08913 450 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 TROVE2P10155 538 aaKnown RBP eCLIP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF16P17020 682 aaPredicted RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 GIFP27352 417 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 GZMMP51124 257 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 RPS23P62266 143 aaKnown RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 COQ5Q5HYK3 327 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 LRFN4Q6PJG9 635 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 WDFY1Q8IWB7 410 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 CDK20Q8IZL9 346 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF786Q8N393 782 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 SLC22A24Q8N4F4 322 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 LRRC17Q8N6Y2 441 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR8J3Q8NGG0 315 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR4D11Q8NGI4 311 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 UBASH3BQ8TF42 649 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 MRPL24Q96A35 216 aaKnown RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 LRRC58Q96CX6 371 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 MSI2Q96DH6 328 aaKnown RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF75AQ96N20 296 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 MYCBPQ99417 103 aaPredicted RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF426Q9BUY5 554 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 POLR2J2Q9GZM3 115 aaKnown RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 FAM107BQ9H098 131 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 POLR2J3Q9H1A7 115 aaKnown RBP10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 REV1Q9UBZ9 1251 aa10.71□□□□□ -0.69
CAPRIN1-213ENST00000533562 A0A1W2PRG6 482 aa10.7□□□□□ -0.7
CAPRIN1-213ENST00000533562 FBP2O00757 339 aa10.7□□□□□ -0.7
CAPRIN1-213ENST00000533562 DHHO43323 396 aa10.7□□□□□ -0.7
CAPRIN1-213ENST00000533562 IGHG1P01857 330 aa10.7□□□□□ -0.7
CAPRIN1-213ENST00000533562 MT-ND1P03886 318 aa10.7□□□□□ -0.7
CAPRIN1-213ENST00000533562 SERPINA5P05154 406 aa10.7□□□□□ -0.7
CAPRIN1-213ENST00000533562 ASAH2BP0C7U1 165 aa10.7□□□□□ -0.7
CAPRIN1-213ENST00000533562 H2AFXP16104 143 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms