RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 RAB1AP62820 205 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF74Q16587 644 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 CGB2Q6NT52 195 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 RASSF5Q8WWW0 418 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 MSI2Q96DH6 328 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 MS4A3Q96HJ5 214 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 MPP4Q96JB8 637 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 SH3GL1Q99961 368 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 CHODLQ9H9P2 273 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 SAR1AQ9NR31 198 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 NANSQ9NR45 359 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 SLC7A7Q9UM01 511 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 ENTPD5O75356 428 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 UBL3O95164 117 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 ADRA2AP08913 450 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF23P17027 643 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 CD247P20963 164 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 PCGF2P35227 344 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 GIPRP48546 466 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZP4Q12836 540 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 KLF10Q13118 480 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 GKAP1Q5VSY0 366 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 WDR88Q6ZMY6 472 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 SLC35D2Q76EJ3 337 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 PIWIL3Q7Z3Z3 882 aaKnown RBP19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 WDFY1Q8IWB7 410 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 ARIH2OSQ8N7S6 290 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 OR4D11Q8NGI4 311 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 OR6X1Q8NH79 312 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 REPIN1Q9BWE0 567 aaKnown RBP19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 GLTPQ9NZD2 209 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 FBXL3Q9UKT7 428 aa19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 HEATR1Q9H583 2144 aaKnown RBP19.24■□□□□ 0.67
TRAPPC4-210ENST00000531290 BBIP1A8MTZ0 92 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 KPNA4O00629 521 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 CCDC22O60826 627 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 TGFAP01135 160 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 THY1P04216 161 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF14P17017 642 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 LSP1P33241 339 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 EVX1P49640 407 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 GALK2Q01415 458 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 VMACQ2NL98 169 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 CDK20Q8IZL9 346 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 PCYOX1LQ8NBM8 494 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 UBASH3BQ8TF42 649 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 TMEM54Q969K7 222 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF566Q969W8 418 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 TAMM41Q96BW9 452 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 SLC19A3Q9BZV2 496 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 TAS2R5Q9NYW4 299 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF229Q9UJW7 825 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 CAPN7Q9Y6W3 813 aa19.23■□□□□ 0.67
TRAPPC4-210ENST00000531290 LOC100653049A0A140TA62 436 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 SLC22A2O15244 555 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 PHF1O43189 567 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 KRT34O76011 436 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 LYPD3O95274 346 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 NPPAP01160 153 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 UMPSP11172 480 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF35P13682 527 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 GIFP27352 417 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 COQ5Q5HYK3 327 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF786Q8N393 782 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 LRRC17Q8N6Y2 441 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 MRPL24Q96A35 216 aaKnown RBP19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 SLC25A44Q96H78 314 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF75AQ96N20 296 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 NSRP1Q9H0G5 558 aaKnown RBP19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 GID8Q9NWU2 228 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 REV1Q9UBZ9 1251 aa19.22■□□□□ 0.67
TRAPPC4-210ENST00000531290 MRASO14807 208 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 SYNGR3O43761 229 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 SRD5A1P18405 259 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 HNF1AP20823 631 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 IGFBP5P24593 272 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 GLRXP35754 106 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 CHN2P52757 468 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 RPS23P62266 143 aaKnown RBP19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 FAM120AOSQ5T036 256 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 NANOGP8Q6NSW7 305 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 CCDC80Q76M96 950 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 SKA3Q8IX90 412 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 ECSITQ9BQ95 431 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 MRPL37Q9BZE1 423 aaKnown RBP19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 PCDHAC1Q9H158 963 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 TPK1Q9H3S4 243 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 MS4A5Q9H3V2 200 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 NANOGQ9H9S0 305 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZNF224Q9NZL3 707 aa19.21■□□□□ 0.67
TRAPPC4-210ENST00000531290 LRP5LA4QPB2 252 aa19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 M0R233 179 aa19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 FARS2O95363 451 aaKnown RBP19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 BCL10O95999 233 aa19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 OR8G3PP0DMU2 310 aa19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 RAB39AQ14964 217 aa19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 LRFN4Q6PJG9 635 aa19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 CPLX4Q7Z7G2 160 aa19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 PHC2Q8IXK0 858 aa19.2■□□□□ 0.66
TRAPPC4-210ENST00000531290 SLC22A24Q8N4F4 322 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms