RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 RAB1AP62820 205 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 CYLC2Q14093 348 aaPredicted RBP17.98■□□□□ 0.47
CLDND1-216ENST00000507944 NANOGP8Q6NSW7 305 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 CCDC80Q76M96 950 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 CDK20Q8IZL9 346 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 LRRC17Q8N6Y2 441 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 RASSF5Q8WWW0 418 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 TMEM54Q969K7 222 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 MSI2Q96DH6 328 aaKnown RBP17.98■□□□□ 0.47
CLDND1-216ENST00000507944 BPESC1Q9GZL8 116 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 SHARPINQ9H0F6 387 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 PCDHAC1Q9H158 963 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 NANOGQ9H9S0 305 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
CLDND1-216ENST00000507944 GLTPQ9NZD2 209 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 ZNF224Q9NZL3 707 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 SPEF1Q9Y4P9 236 aa17.98■□□□□ 0.47
CLDND1-216ENST00000507944 KPNA4O00629 521 aaPredicted RBP17.97■□□□□ 0.47
CLDND1-216ENST00000507944 RNF13O43567 381 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 HIST1H2ABP04908 130 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 ZNF35P13682 527 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 ZNF23P17027 643 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 GIPRP48546 466 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 TRMT5Q32P41 509 aaKnown RBP17.97■□□□□ 0.47
CLDND1-216ENST00000507944 FAM166AQ6J272 317 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 HIST3H2AQ7L7L0 130 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 PIWIL3Q7Z3Z3 882 aaKnown RBP17.97■□□□□ 0.47
CLDND1-216ENST00000507944 ARIH2OSQ8N7S6 290 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 HIST1H2ACQ93077 130 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 SLC19A3Q9BZV2 496 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 ZNF229Q9UJW7 825 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 KCNS2Q9ULS6 477 aa17.97■□□□□ 0.47
CLDND1-216ENST00000507944 UBL3O95164 117 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 RAB36O95755 333 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 IGFBP1P08833 259 aaPredicted RBP17.96■□□□□ 0.47
CLDND1-216ENST00000507944 ADRA2AP08913 450 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 GIFP27352 417 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 CRYBA2P53672 197 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 SKA3Q8IX90 412 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 ZNF566Q969W8 418 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 MRPL24Q96A35 216 aaKnown RBP17.96■□□□□ 0.47
CLDND1-216ENST00000507944 SH3GL1Q99961 368 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 ZNF426Q9BUY5 554 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 TMEM120AQ9BXJ8 343 aa17.96■□□□□ 0.47
CLDND1-216ENST00000507944 VIMP08670 466 aaKnown RBP17.95■□□□□ 0.46
CLDND1-216ENST00000507944 ASAH2BP0C7U1 165 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 UMPSP11172 480 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 H2AFXP16104 143 aaPredicted RBP17.95■□□□□ 0.46
CLDND1-216ENST00000507944 IGFBP5P24593 272 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 GLRXP35754 106 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 EVX1P49640 407 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 MELKQ14680 651 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 RAB39AQ14964 217 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 MSMPQ1L6U9 139 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 RABL3Q5HYI8 236 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 LRFN4Q6PJG9 635 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 ZNF786Q8N393 782 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 UBASH3BQ8TF42 649 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 TMEM158Q8WZ71 300 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 LRRC58Q96CX6 371 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 SLC25A44Q96H78 314 aaPredicted RBP17.95■□□□□ 0.46
CLDND1-216ENST00000507944 ECSITQ9BQ95 431 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 PRSS27Q9BQR3 290 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 MRPL37Q9BZE1 423 aaKnown RBP17.95■□□□□ 0.46
CLDND1-216ENST00000507944 CHODLQ9H9P2 273 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 FBXL3Q9UKT7 428 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 SH3GLB1Q9Y371 365 aa17.95■□□□□ 0.46
CLDND1-216ENST00000507944 DHHO43323 396 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 BCL10O95999 233 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 PATE4P0C8F1 98 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 GALK2Q01415 458 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 GKAP1Q5VSY0 366 aaPredicted RBP17.94■□□□□ 0.46
CLDND1-216ENST00000507944 CARM1Q86X55 608 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 CALHM3Q86XJ0 350 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 SLC22A24Q8N4F4 322 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 OR8J3Q8NGG0 315 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 FGFBP3Q8TAT2 258 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 MEPEQ9NQ76 525 aaPredicted RBP17.94■□□□□ 0.46
CLDND1-216ENST00000507944 REV1Q9UBZ9 1251 aa17.94■□□□□ 0.46
CLDND1-216ENST00000507944 LRP5LA4QPB2 252 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 BLOC1S5-TXNDC5H3BN57 136 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 PHF1O43189 567 aaPredicted RBP17.93■□□□□ 0.46
CLDND1-216ENST00000507944 SYNGR3O43761 229 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 ENTPD5O75356 428 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 TGFAP01135 160 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 SERPINA5P05154 406 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 OR8G3PP0DMU2 310 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 MMEL1Q495T6 779 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 NANOGNBQ7Z5D8 188 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 PHC2Q8IXK0 858 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 SYT3Q9BQG1 590 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 TPK1Q9H3S4 243 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 MRGBPQ9NV56 204 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 TMEM38BQ9NVV0 291 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 BAG5Q9UL15 447 aa17.93■□□□□ 0.46
CLDND1-216ENST00000507944 SVEP1Q4LDE5 3571 aa17.92■□□□□ 0.46
CLDND1-216ENST00000507944 M0R233 179 aa17.92■□□□□ 0.46
CLDND1-216ENST00000507944 FXYD1O00168 92 aa17.92■□□□□ 0.46
CLDND1-216ENST00000507944 SASH3O75995 380 aa17.92■□□□□ 0.46
CLDND1-216ENST00000507944 FARS2O95363 451 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms