RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 MARCH1Q8TCQ1 289 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 SSC4DQ8WTU2 575 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 TRUB1Q8WWH5 349 aaKnown RBP4.23□□□□□ -1.73
SND1-216ENST00000492840 CRYGNQ8WXF5 182 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 TOMM40LQ969M1 308 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.23□□□□□ -1.73
SND1-216ENST00000492840 CXorf40BQ96DE9 158 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 ZNF641Q96N77 438 aaPredicted RBP4.23□□□□□ -1.73
SND1-216ENST00000492840 P2RY13Q9BPV8 354 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 PLA2G2FQ9BZM2 168 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 TRIM4Q9C037 500 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 PARLQ9H300 379 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 ELOVL6Q9H5J4 265 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 C8orf33Q9H7E9 229 aaPredicted RBP4.23□□□□□ -1.73
SND1-216ENST00000492840 NIPAL2Q9H841 368 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 NHEJ1Q9H9Q4 299 aaPredicted RBP4.23□□□□□ -1.73
SND1-216ENST00000492840 LYRM4Q9HD34 91 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.23□□□□□ -1.73
SND1-216ENST00000492840 CUTCQ9NTM9 273 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 EHFQ9NZC4 300 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 RHBDD3Q9Y3P4 386 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 FREM2Q5SZK8 3169 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 USP9YO00507 2555 aaPredicted RBP4.23□□□□□ -1.73
SND1-216ENST00000492840 THADAQ6YHU6 1953 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 FBN2P35556 2912 aa4.23□□□□□ -1.73
SND1-216ENST00000492840 WDFY3Q8IZQ1 3526 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 CNTNAP2Q9UHC6 1331 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TRABD2BA6NFA1 517 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TRDCB7Z8K6 153 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 WWP2O00308 870 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 POLR3GO15318 223 aaPredicted RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 UGT2B17O75795 530 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 PATE4P0C8F1 98 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 T-ENOLP0DO92 83 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 GCFC2P16383 781 aaKnown RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 PSMC3P17980 439 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 CD9P21926 228 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 U2AF2P26368 475 aaKnown RBP eCLIP4.22□□□□□ -1.73
SND1-216ENST00000492840 STOMP27105 288 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 ANXA13P27216 316 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 CHRNB4P30926 498 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 FGF9P31371 208 aaPredicted RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 XCR1P46094 333 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 NOVP48745 357 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 BCAP31P51572 246 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 NANOS3P60323 173 aaKnown RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 FKBP3Q00688 224 aaKnown RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 FHL1Q13642 323 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 ITIH4Q14624 930 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 ZNF672Q499Z4 452 aaPredicted RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 VPS26BQ4G0F5 336 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TEX44Q53QW1 395 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 PPM1LQ5SGD2 360 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 SLC22A10Q63ZE4 541 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 ZNF57Q68EA5 555 aaPredicted RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 LRRC31Q6UY01 552 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 NIPA1Q7RTP0 329 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 CCDC65Q8IXS2 484 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 GPR65Q8IYL9 337 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 CSGALNACT2Q8N6G5 542 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 NUP37Q8NFH4 326 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 FLVCR1-AS1Q8TAF5 88 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 MRGPRDQ8TDS7 321 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 ING5Q8WYH8 240 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TMEM190Q8WZ59 177 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TMIGD2Q96BF3 282 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 MED8Q96G25 268 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TMEM80Q96HE8 168 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 CELF6Q96J87 481 aaKnown RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 LYZL4Q96KX0 146 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 MBOAT7Q96N66 472 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 KCNA7Q96RP8 456 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 RNF2Q99496 336 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TMEM175Q9BSA9 504 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 PPDPFQ9H3Y8 114 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 AGPAT3Q9NRZ7 376 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 PLCXD1Q9NUJ7 323 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 NUDT15Q9NV35 164 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 MTCH1Q9NZJ7 389 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TMEM181Q9P2C4 612 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 TNRC6BQ9UPQ9 1833 aaKnown RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 VWA8A3KMH1 1905 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 POLQO75417 2590 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 PI4KAP42356 2102 aa4.22□□□□□ -1.73
SND1-216ENST00000492840 GOLGA4Q13439 2230 aaKnown RBP4.22□□□□□ -1.73
SND1-216ENST00000492840 NOTCH4Q99466 2003 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 PCNX1Q96RV3 2341 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 LOC100653049A0A140TA62 436 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 TEX48A0A1B0GUV7 120 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 CCDC182A6NF36 153 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 VSTM2BA6NLU5 285 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 MPTX1A8MV57 137 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 A8MXQ7 604 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 HIP1O00291 1037 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 LATO43561 262 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 PSTPIP1O43586 416 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 PRKYO43930 277 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 OR10H3O60404 316 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 NMT2O60551 498 aa4.21□□□□□ -1.74
SND1-216ENST00000492840 KRT34O76011 436 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms