RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SELENOPP49908 381 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 PMPCAQ10713 525 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 C6orf52Q5T4I8 152 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 ZNF691Q5VV52 312 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 SDR9C7Q8NEX9 313 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 OR8J1Q8NGP2 316 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 OR4K13Q8NH42 304 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 HDAC2Q92769 488 aaKnown RBP16.51■□□□□ 0.23
MCF2L-230ENST00000491028 ZNF775Q96BV0 537 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-230ENST00000491028 LRR1Q96L50 414 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 KCNK17Q96T54 332 aa16.51■□□□□ 0.23
MCF2L-230ENST00000491028 MRPL13Q9BYD1 178 aaKnown RBP16.51■□□□□ 0.23
MCF2L-230ENST00000491028 A0A1B0GUH1 482 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 PRSS37A4D1T9 235 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 CCL21O00585 134 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 MPZL2O60487 215 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 TNFSF13O75888 250 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 IL18BPO95998 194 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 PAICSP22234 425 aaKnown RBP16.5■□□□□ 0.23
MCF2L-230ENST00000491028 CTSSP25774 331 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 NTF4P34130 210 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 CDKN2AP42771 156 aaKnown RBP16.5■□□□□ 0.23
MCF2L-230ENST00000491028 KIR2DL2P43627 348 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-230ENST00000491028 CLRN1P58418 232 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 SIRPAP78324 504 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 RUNX1T1Q06455 604 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 CAMK2DQ13557 499 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 ZNF362Q5T0B9 420 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-230ENST00000491028 LEG1Q6P5S2 330 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 PTCHD4Q6ZW05 846 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 USP51Q70EK9 711 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 NUFIP2Q7Z417 695 aaKnown RBP16.5■□□□□ 0.23
MCF2L-230ENST00000491028 CCDC71Q8IV32 467 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-230ENST00000491028 CNEP1R1Q8N9A8 125 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 SLC37A3Q8NCC5 494 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 TMEM163Q8TC26 289 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 RND1Q92730 232 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 APH1AQ96BI3 265 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 ANKRD60Q9BZ19 345 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 LINC00470Q9BZP3 86 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 SLCO5A1Q9H2Y9 848 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 Q9H521 79 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 VSX1Q9NZR4 365 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-230ENST00000491028 FOXD3Q9UJU5 478 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-230ENST00000491028 HSPE1-MOB4S4R3N1 261 aa16.5■□□□□ 0.23
MCF2L-230ENST00000491028 M0R3G1 203 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 SLC2A10O95528 541 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 GNLYP22749 145 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 OPRM1P35372 400 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 OR3A2P47893 321 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 CSNK1A1P48729 337 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 EFNB1P98172 346 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 CD47Q08722 323 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 FOXF2Q12947 444 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 ITGADQ13349 1161 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 CRMP1Q14194 572 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 IGFBP7Q16270 282 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 HIST3H3Q16695 136 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 CARD17Q5XLA6 110 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 MTFR2Q6P444 385 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 WDFY1Q8IWB7 410 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 C20orf196Q8IYI0 205 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 ZNF100Q8IYN0 542 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 C8orf59Q8N0T1 100 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-230ENST00000491028 TCEANCQ8N8B7 351 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 POMGNT2Q8NAT1 580 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 NAXEQ8NCW5 288 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 NPEPL1Q8NDH3 523 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 OR6N1Q8NGY5 312 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 TMEM54Q969K7 222 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 NMNAT3Q96T66 252 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 B3GAT2Q9NPZ5 323 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 GLTPQ9NZD2 209 aa16.49■□□□□ 0.23
MCF2L-230ENST00000491028 A0A0G2JNJ9 132 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 SLC22A23A1A5C7 686 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 PRR23D1E9PI22 279 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-230ENST00000491028 PRKYO43930 277 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 PRR23D2P0DMB1 279 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-230ENST00000491028 CD8BP10966 210 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 UQCRFS1P47985 274 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 SNRPGP62308 76 aaKnown RBP16.48■□□□□ 0.23
MCF2L-230ENST00000491028 C4orf17Q53FE4 359 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 THEM4Q5T1C6 240 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 VWA1Q6PCB0 445 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 DNM1P34Q6PK57 102 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 TFAP2EQ6VUC0 442 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 ENTHD1Q8IYW4 607 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 MUS81Q96NY9 551 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 RBP7Q96R05 134 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 DDOQ99489 341 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 C12orf49Q9H741 205 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 PLSCR4Q9NRQ2 329 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 ASB6Q9NWX5 421 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 ZNF629Q9UEG4 869 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-230ENST00000491028 Q9UFV3 132 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 PROCRQ9UNN8 238 aa16.48■□□□□ 0.23
MCF2L-230ENST00000491028 POLEQ07864 2286 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 OR6C68A6NDL8 312 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 H7C1C5 153 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 TLX2O43763 284 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms