RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PER3P56645 1201 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 CDC42P60953 191 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 EFNB1P98172 346 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 STK11Q15831 433 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 HIST3H3Q16695 136 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 TMEM236Q5W0B7 351 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 MTFR2Q6P444 385 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 NIPAL3Q6P499 406 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 CASP12Q6UXS9 341 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 PTCHD4Q6ZW05 846 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 AAED1Q7RTV5 226 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 JAZF1Q86VZ6 243 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 CCDC71Q8IV32 467 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 WDFY1Q8IWB7 410 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 GCNT2Q8N0V5 402 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 HDAC2Q92769 488 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 TMEM54Q969K7 222 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 ZNF566Q969W8 418 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 APH1AQ96BI3 265 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 INTS12Q96CB8 462 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 NMD3Q96D46 503 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 DDOQ99489 341 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 SLCO5A1Q9H2Y9 848 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 MALT1Q9UDY8 824 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 ZNF629Q9UEG4 869 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 Q9UFV3 132 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 SH3BGRL2Q9UJC5 107 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 RAB26Q9ULW5 256 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 CLEC4AQ9UMR7 237 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 GMPPBQ9Y5P6 360 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 HSPE1-MOB4S4R3N1 261 aa11.11□□□□□ -0.63
TRAPPC12-218ENST00000479897 PRSS37A4D1T9 235 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 CGAP01215 116 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 GNLYP22749 145 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 OPRM1P35372 400 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 UQCRFS1P47985 274 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 PCYT1AP49585 367 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 RUNX1T1Q06455 604 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 PMPCAQ10713 525 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 FOXF2Q12947 444 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 ITGADQ13349 1161 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 IGFBP7Q16270 282 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 C4orf17Q53FE4 359 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 ZNF691Q5VV52 312 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 VWA1Q6PCB0 445 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 MYO7BQ6PIF6 2116 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 TFAP2EQ6VUC0 442 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 NUFIP2Q7Z417 695 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 C20orf196Q8IYI0 205 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 DEPDC4Q8N2C3 294 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 POMGNT2Q8NAT1 580 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 SLC37A3Q8NCC5 494 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 NPEPL1Q8NDH3 523 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 SETD9Q8NE22 299 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 OR8J1Q8NGP2 316 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 FAM81AQ8TBF8 368 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 TRUB1Q8WWH5 349 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 CYGBQ8WWM9 190 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 RND1Q92730 232 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 APOL4Q9BPW4 351 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 EMC6Q9BV81 110 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 ANKRD60Q9BZ19 345 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 NMNAT2Q9BZQ4 307 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 PIGMQ9H3S5 423 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 PLSCR4Q9NRQ2 329 aa11.1□□□□□ -0.63
TRAPPC12-218ENST00000479897 PCNX1Q96RV3 2341 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 SLC22A23A1A5C7 686 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 RPL36A-HNRNPH2H7BZ11 118 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 CCL21O00585 134 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 MPZL2O60487 215 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 RENP00797 406 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 CDKN2AP42771 156 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 CSNK1A1P48729 337 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 SLC25A1P53007 311 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 CLRN1P58418 232 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 SNRPGP62308 76 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 SIRPAP78324 504 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 TEKQ02763 1124 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 CAMK2DQ13557 499 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 CRMP1Q14194 572 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 SNAPC1Q16533 368 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 SLC25A30Q5SVS4 291 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 THEM4Q5T1C6 240 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 SLC35F1Q5T1Q4 408 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 C10orf128Q5T292 105 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 LEG1Q6P5S2 330 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 SDR9C7Q8NEX9 313 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 OR52E2Q8NGJ4 325 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 OR4K13Q8NH42 304 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 TMEM163Q8TC26 289 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 STARD4Q96DR4 205 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 PLEKHA8Q96JA3 519 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 NMNAT3Q96T66 252 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 RACGAP1Q9H0H5 632 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 IMPAD1Q9NX62 359 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 TVP23BQ9NYZ1 205 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 GLTPQ9NZD2 209 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 PROCRQ9UNN8 238 aa11.09□□□□□ -0.63
TRAPPC12-218ENST00000479897 FKBP7Q9Y680 259 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms