RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
TOM1-211ENST00000449508 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■□□□ 13.9
TOM1-211ENST00000449508 FBN3Q75N90 2809 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 KPNA4O00629 521 aaPredicted RBP11.83□□□□□ -0.52
TOM1-211ENST00000449508 LYPD3O95274 346 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 RAB36O95755 333 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 TGFAP01135 160 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 ADRA2AP08913 450 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 UMPSP11172 480 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 ZNF35P13682 527 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 ZNF14P17017 642 aaPredicted RBP11.83□□□□□ -0.52
TOM1-211ENST00000449508 ZNF23P17027 643 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 CD247P20963 164 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 PCGF2P35227 344 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 GIPRP48546 466 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 ZP4Q12836 540 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 ZNF74Q16587 644 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 VMACQ2NL98 169 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 NANOGP8Q6NSW7 305 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 PIWIL3Q7Z3Z3 882 aaKnown RBP11.83□□□□□ -0.52
TOM1-211ENST00000449508 OR6X1Q8NH79 312 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 RASSF5Q8WWW0 418 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 TMEM158Q8WZ71 300 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 TMEM54Q969K7 222 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 TAMM41Q96BW9 452 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 MPP4Q96JB8 637 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 DENND2DQ9H6A0 471 aaPredicted RBP11.83□□□□□ -0.52
TOM1-211ENST00000449508 VIPAS39Q9H9C1 493 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 NANOGQ9H9S0 305 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 ARGLU1Q9NWB6 273 aaPredicted RBP11.83□□□□□ -0.52
TOM1-211ENST00000449508 GLTPQ9NZD2 209 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 ZNF224Q9NZL3 707 aa11.83□□□□□ -0.52
TOM1-211ENST00000449508 BLOC1S5-TXNDC5H3BN57 136 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 FBP2O00757 339 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 UBL3O95164 117 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 PATE4P0C8F1 98 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 IGFBP5P24593 272 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 GIFP27352 417 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 GLRXP35754 106 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 GZMMP51124 257 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 GALK2Q01415 458 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 MELKQ14680 651 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 RAB39AQ14964 217 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 MMEL1Q495T6 779 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 GKAP1Q5VSY0 366 aaPredicted RBP11.82□□□□□ -0.52
TOM1-211ENST00000449508 LRFN4Q6PJG9 635 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 TSPYL5Q86VY4 417 aaPredicted RBP11.82□□□□□ -0.52
TOM1-211ENST00000449508 SKA3Q8IX90 412 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 PHC2Q8IXK0 858 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 ZNF786Q8N393 782 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 UBASH3BQ8TF42 649 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 ZNF566Q969W8 418 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 MRPL24Q96A35 216 aaKnown RBP11.82□□□□□ -0.52
TOM1-211ENST00000449508 SLC25A44Q96H78 314 aaPredicted RBP11.82□□□□□ -0.52
TOM1-211ENST00000449508 SH3GL1Q99961 368 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 ECSITQ9BQ95 431 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 MRPL37Q9BZE1 423 aaKnown RBP11.82□□□□□ -0.52
TOM1-211ENST00000449508 SLC19A3Q9BZV2 496 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 TPK1Q9H3S4 243 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 ZNF229Q9UJW7 825 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 SH3GLB1Q9Y371 365 aa11.82□□□□□ -0.52
TOM1-211ENST00000449508 LRP5LA4QPB2 252 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 PHF1O43189 567 aaPredicted RBP11.81□□□□□ -0.52
TOM1-211ENST00000449508 SYNGR3O43761 229 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 BCL10O95999 233 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 VIMP08670 466 aaKnown RBP11.81□□□□□ -0.52
TOM1-211ENST00000449508 IGFBP1P08833 259 aaPredicted RBP11.81□□□□□ -0.52
TOM1-211ENST00000449508 OR8G3PP0DMU2 310 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 LSP1P33241 339 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 EVX1P49640 407 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 MSMPQ1L6U9 139 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 RABL3Q5HYI8 236 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 FAM120AOSQ5T036 256 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 IL17RELQ6ZVW7 336 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 CCDC80Q76M96 950 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 NANOGNBQ7Z5D8 188 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 SLC22A24Q8N4F4 322 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 FGFBP3Q8TAT2 258 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 PRSS27Q9BQR3 290 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 ZNF426Q9BUY5 554 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
TOM1-211ENST00000449508 TMEM120AQ9BXJ8 343 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 PCDHAC1Q9H158 963 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 MS4A5Q9H3V2 200 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 REV1Q9UBZ9 1251 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 FBXL3Q9UKT7 428 aa11.81□□□□□ -0.52
TOM1-211ENST00000449508 LYNX1G3V0Z9 82 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 M0R233 179 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 DHHO43323 396 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 LILRA1O75019 489 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 ENTPD5O75356 428 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 FARS2O95363 451 aaKnown RBP11.8□□□□□ -0.52
TOM1-211ENST00000449508 SERPINA5P05154 406 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 QDPRP09417 244 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 ASAH2BP0C7U1 165 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 LYNX1P0DP58 116 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 SRD5A1P18405 259 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 FUT1P19526 365 aa11.8□□□□□ -0.52
TOM1-211ENST00000449508 TCN1P20061 433 aaPredicted RBP11.8□□□□□ -0.52
TOM1-211ENST00000449508 HNF1AP20823 631 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms