RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 OR52R1Q8NGF1 315 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 OR5M8Q8NGP6 311 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 PYCARD-AS1I3L0S3 204 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 PDX1P52945 283 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 CARD17Q5XLA6 110 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 OR52B4Q8NGK2 314 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 OR4C16Q8NGL9 310 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 NPRL2Q8WTW4 380 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 BHLHE40O14503 412 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 LAP3P28838 519 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 LIM2P55344 173 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 MCCD1P59942 119 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-202ENST00000409031 REEP5Q00765 189 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 EXOSC7Q15024 291 aaKnown RBP16.28■□□□□ 0.2
SMPD4-202ENST00000409031 ZNF79Q15937 498 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 WDR88Q6ZMY6 472 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 BCL7CQ8WUZ0 217 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-202ENST00000409031 PEX11GQ96HA9 241 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 ISG20L2Q9H9L3 353 aaKnown RBP16.28■□□□□ 0.2
SMPD4-202ENST00000409031 IL20Q9NYY1 176 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 CD3DP04234 171 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 TAS2R30P59541 319 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 HTD2P86397 168 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 MPPED2Q15777 294 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 PDZD11Q5EBL8 140 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 C11orf87Q6NUJ2 197 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 AKR7LQ8NHP1 331 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 EPHX3Q9H6B9 360 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 MAST2Q6P0Q8 1798 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 ZC3H12DA2A288 527 aaKnown RBP16.28■□□□□ 0.2
SMPD4-202ENST00000409031 CNMDO75829 334 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 WNT1P04628 370 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 RFLNAQ6ZTI6 216 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 SLC35D2Q76EJ3 337 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 LMNTD1Q8N9Z9 388 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 DEFB118Q96PH6 123 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 TMEM100Q9NV29 134 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 STRAPQ9Y3F4 350 aaKnown RBP16.28■□□□□ 0.2
SMPD4-202ENST00000409031 NPIPA2E9PIF3 369 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 NPIPA3F8WFD2 350 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 LDB3O75112 727 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 SRPXP78539 464 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 MFSD12Q6NUT3 480 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 PLPP7Q8NBV4 271 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 OR51Q1Q8NH59 317 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 OR5K2Q8NHB8 316 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 FOXJ1Q92949 421 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 SENP5Q96HI0 755 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-202ENST00000409031 ENKD1Q9H0I2 346 aa16.28■□□□□ 0.2
SMPD4-202ENST00000409031 FITM1A5D6W6 292 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 CD300LBA8K4G0 201 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 HRO43593 1189 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 SELENOFO60613 162 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 RHOP08100 348 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 LIMS3P0CW19 117 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 LIMS4P0CW20 117 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 CALCRP30988 508 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 SGCBQ16585 318 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 GLYR1Q49A26 553 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-202ENST00000409031 SLC48A1Q6P1K1 146 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 OR2W3Q7Z3T1 314 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 OR13C5Q8NGS8 318 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 RREB1Q92766 1687 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 GPR137Q96N19 417 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 MIXL1Q9H2W2 232 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 CTSLP07711 333 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 CD37P11049 281 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 PJVKQ0ZLH3 352 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 CCSMST1Q4G0I0 132 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 HTR3DQ70Z44 454 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 CAMKMTQ7Z624 323 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 OR14L1PQ8NHC6 308 aa16.27■□□□□ 0.2
SMPD4-202ENST00000409031 SULT1A3P0DMM9 295 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 SULT1A4P0DMN0 295 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 FABP9Q0Z7S8 132 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 KIAA0040Q15053 153 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 MEP1BQ16820 701 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 UEVLDQ8IX04 471 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 FAM160A2Q8N612 972 aaPredicted RBP16.27■□□□□ 0.19
SMPD4-202ENST00000409031 SLC16A11Q8NCK7 471 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 PTDSS2Q9BVG9 487 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 MSRAQ9UJ68 235 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 RGPD5Q99666 1765 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 A0A0U1RQK1 487 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 RNASEK-C17orf49H0YIS7 233 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 SERPINA2P20848 420 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 DIO1P49895 249 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 MRPS34P82930 218 aaKnown RBP16.27■□□□□ 0.19
SMPD4-202ENST00000409031 KIR2DS3Q14952 304 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 LGALSLQ3ZCW2 172 aaPredicted RBP16.27■□□□□ 0.19
SMPD4-202ENST00000409031 FAM219BQ5XKK7 198 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 CERS4Q9HA82 394 aa16.27■□□□□ 0.19
SMPD4-202ENST00000409031 LRP5O75197 1615 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 A0A1W2PQU0 124 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 NUDT21O43809 227 aaKnown RBP16.26■□□□□ 0.19
SMPD4-202ENST00000409031 PMP2P02689 132 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 GABRA1P14867 456 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 EPHA1P21709 976 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms