RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 OR4D11Q8NGI4 311 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 RASSF5Q8WWW0 418 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 LRRC58Q96CX6 371 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 MS4A3Q96HJ5 214 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 FOXB1Q99853 325 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 SAR1AQ9NR31 198 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 SPEF1Q9Y4P9 236 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 CUBNO60494 3623 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 MXRA5Q9NR99 2828 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 TMEM129A0AVI4 362 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 BBIP1A8MTZ0 92 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 RAB36O95755 333 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 THY1P04216 161 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 IFNGR1P15260 489 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 NR4A1P22736 598 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 PTDSS1P48651 473 aaKnown RBP18.17■□□□□ 0.5
VSX1-201ENST00000376707 ARFIP2P53365 341 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 BIDP55957 195 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 KLF10Q13118 480 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 TTC33Q6PID6 262 aaPredicted RBP18.17■□□□□ 0.5
VSX1-201ENST00000376707 RBM45Q8IUH3 476 aaKnown RBP18.17■□□□□ 0.5
VSX1-201ENST00000376707 VANGL1Q8TAA9 524 aaPredicted RBP18.17■□□□□ 0.5
VSX1-201ENST00000376707 SLC26A7Q8TE54 656 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 ADAMTS16Q8TE57 1224 aa18.17■□□□□ 0.5
VSX1-201ENST00000376707 FBN3Q75N90 2809 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 CH25HO95992 272 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 TGFAP01135 160 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 ADRA2AP08913 450 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 ZNF14P17017 642 aaPredicted RBP18.16■□□□□ 0.5
VSX1-201ENST00000376707 SRD5A1P18405 259 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 HNF1AP20823 631 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 GIFP27352 417 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 GIPRP48546 466 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 RAB1AP62820 205 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 ZNF74Q16587 644 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 RABL3Q5HYI8 236 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 FAM120AOSQ5T036 256 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 WDR88Q6ZMY6 472 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 TSPYL5Q86VY4 417 aaPredicted RBP18.16■□□□□ 0.5
VSX1-201ENST00000376707 ZNF426Q9BUY5 554 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 DENND2DQ9H6A0 471 aaPredicted RBP18.16■□□□□ 0.5
VSX1-201ENST00000376707 SLC7A7Q9UM01 511 aa18.16■□□□□ 0.5
VSX1-201ENST00000376707 YLPM1P49750 1951 aaKnown RBP18.15■□□□□ 0.5
VSX1-201ENST00000376707 TRAPPC13A5PLN9 417 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 KPNA4O00629 521 aaPredicted RBP18.15■□□□□ 0.5
VSX1-201ENST00000376707 UBL3O95164 117 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 GALK2Q01415 458 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 MAPRE2Q15555 327 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 GKAP1Q5VSY0 366 aaPredicted RBP18.15■□□□□ 0.5
VSX1-201ENST00000376707 IL17RELQ6ZVW7 336 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 SLC35D2Q76EJ3 337 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 ZNF786Q8N393 782 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 OR6X1Q8NH79 312 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 UBASH3BQ8TF42 649 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 MRPL24Q96A35 216 aaKnown RBP18.15■□□□□ 0.5
VSX1-201ENST00000376707 MPP4Q96JB8 637 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 ZNF75AQ96N20 296 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 ECSITQ9BQ95 431 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 SLC19A3Q9BZV2 496 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 TPK1Q9H3S4 243 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 CCDC134Q9H6E4 229 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 NANSQ9NR45 359 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 FBXL3Q9UKT7 428 aa18.15■□□□□ 0.5
VSX1-201ENST00000376707 LRP5LA4QPB2 252 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 MRASO14807 208 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 RNF13O43567 381 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 HIST1H2ABP04908 130 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 VIMP08670 466 aaKnown RBP18.14■□□□□ 0.49
VSX1-201ENST00000376707 ZNF35P13682 527 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 LSP1P33241 339 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 EVX1P49640 407 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 CHN2P52757 468 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 ZP4Q12836 540 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 MMEL1Q495T6 779 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 REP15Q6BDI9 236 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 HIST3H2AQ7L7L0 130 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 PIWIL3Q7Z3Z3 882 aaKnown RBP18.14■□□□□ 0.49
VSX1-201ENST00000376707 HIST1H2ACQ93077 130 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 TMEM54Q969K7 222 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 ZNF566Q969W8 418 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 MRPL37Q9BZE1 423 aaKnown RBP18.14■□□□□ 0.49
VSX1-201ENST00000376707 GLTPQ9NZD2 209 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 ZNF224Q9NZL3 707 aa18.14■□□□□ 0.49
VSX1-201ENST00000376707 STAB1Q9NY15 2570 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 M0R233 179 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 SYNGR3O43761 229 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 ENTPD5O75356 428 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 IGFBP1P08833 259 aaPredicted RBP18.13■□□□□ 0.49
VSX1-201ENST00000376707 UMPSP11172 480 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 GLRXP35754 106 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 RPS23P62266 143 aaKnown RBP18.13■□□□□ 0.49
VSX1-201ENST00000376707 GUCY1A3Q02108 690 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 MELKQ14680 651 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 ERICH5Q6P6B1 374 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 ZNF583Q96ND8 569 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 TAS2R5Q9NYW4 299 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 REV1Q9UBZ9 1251 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 ZNF229Q9UJW7 825 aa18.13■□□□□ 0.49
VSX1-201ENST00000376707 SLC22A2O15244 555 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 TACSTD2P09758 323 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms