RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ZSCAN26Q16670 478 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 ENTPD8Q5MY95 495 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 TTC33Q6PID6 262 aaPredicted RBP18.17■□□□□ 0.5
NEDD8-201ENST00000250495 PIWIL3Q7Z3Z3 882 aaKnown RBP18.17■□□□□ 0.5
NEDD8-201ENST00000250495 PATL1Q86TB9 770 aaKnown RBP18.17■□□□□ 0.5
NEDD8-201ENST00000250495 CDK20Q8IZL9 346 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 OR6T1Q8NGN1 323 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 TSPEARQ8WU66 669 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 HPS1Q92902 700 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 MRPL24Q96A35 216 aaKnown RBP18.17■□□□□ 0.5
NEDD8-201ENST00000250495 MS4A3Q96HJ5 214 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 ZNF75AQ96N20 296 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 MS4A5Q9H3V2 200 aa18.17■□□□□ 0.5
NEDD8-201ENST00000250495 LRP5LA4QPB2 252 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 CPSF4LA6NMK7 179 aaKnown RBP18.16■□□□□ 0.5
NEDD8-201ENST00000250495 SYNGR3O43761 229 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 ENTPD5O75356 428 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 OPN1SWP03999 348 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 VIMP08670 466 aaKnown RBP18.16■□□□□ 0.5
NEDD8-201ENST00000250495 IFNGR1P15260 489 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 GIPRP48546 466 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 MTPNP58546 118 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 GALK2Q01415 458 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 ZP4Q12836 540 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 GKAP1Q5VSY0 366 aaPredicted RBP18.16■□□□□ 0.5
NEDD8-201ENST00000250495 UGT2A3Q6UWM9 527 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 SLC35D2Q76EJ3 337 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 OR6X1Q8NH79 312 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 SLC26A7Q8TE54 656 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 CCDC134Q9H6E4 229 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 NANSQ9NR45 359 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 GLTPQ9NZD2 209 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 REV1Q9UBZ9 1251 aa18.16■□□□□ 0.5
NEDD8-201ENST00000250495 LILRA1O75019 489 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 CH25HO95992 272 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 HIST1H2ABP04908 130 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 IGFBP1P08833 259 aaPredicted RBP18.15■□□□□ 0.5
NEDD8-201ENST00000250495 RPS23P62266 143 aaKnown RBP18.15■□□□□ 0.5
NEDD8-201ENST00000250495 SELPLGQ14242 412 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 NPTX1Q15818 432 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 ZNF74Q16587 644 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 INTS11Q5TA45 600 aaKnown RBP18.15■□□□□ 0.5
NEDD8-201ENST00000250495 IL17RELQ6ZVW7 336 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 HIST3H2AQ7L7L0 130 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 WDFY1Q8IWB7 410 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 GPR32P1Q8NGA4 272 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 ADAMTS16Q8TE57 1224 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 HIST1H2ACQ93077 130 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 TMEM54Q969K7 222 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 MPP4Q96JB8 637 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 MAGEB18Q96M61 343 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 MRPL37Q9BZE1 423 aaKnown RBP18.15■□□□□ 0.5
NEDD8-201ENST00000250495 KAT8Q9H7Z6 458 aaKnown RBP18.15■□□□□ 0.5
NEDD8-201ENST00000250495 TAS2R5Q9NYW4 299 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 ZNF224Q9NZL3 707 aa18.15■□□□□ 0.5
NEDD8-201ENST00000250495 TRAPPC13A5PLN9 417 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 M0R233 179 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 RNF13O43567 381 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 RIN1Q13671 783 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 NFYCQ13952 458 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 RETREG3Q86VR2 466 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 LINC01356Q8N9X3 169 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 RASSF5Q8WWW0 418 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 ZNF566Q969W8 418 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 THOC1Q96FV9 657 aaKnown RBP18.14■□□□□ 0.49
NEDD8-201ENST00000250495 SOX7Q9BT81 388 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 SLC19A3Q9BZV2 496 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 TPK1Q9H3S4 243 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 ZNF229Q9UJW7 825 aa18.14■□□□□ 0.49
NEDD8-201ENST00000250495 APEX1P27695 318 aaKnown RBP18.13■□□□□ 0.49
NEDD8-201ENST00000250495 RAB39AQ14964 217 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 CR1LQ2VPA4 569 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 REP15Q6BDI9 236 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 WDR88Q6ZMY6 472 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 RBM45Q8IUH3 476 aaKnown RBP18.13■□□□□ 0.49
NEDD8-201ENST00000250495 SKA3Q8IX90 412 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 SLC22A24Q8N4F4 322 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 OR10A6Q8NH74 314 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 VANGL1Q8TAA9 524 aaPredicted RBP18.13■□□□□ 0.49
NEDD8-201ENST00000250495 BCAS4Q8TDM0 211 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 SLC25A44Q96H78 314 aaPredicted RBP18.13■□□□□ 0.49
NEDD8-201ENST00000250495 ZNF385DQ9H6B1 395 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 SLC7A7Q9UM01 511 aa18.13■□□□□ 0.49
NEDD8-201ENST00000250495 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 LYPD3O95274 346 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 FARS2O95363 451 aaKnown RBP18.12■□□□□ 0.49
NEDD8-201ENST00000250495 FAM107AO95990 144 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 THY1P04216 161 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 SERPINA5P05154 406 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 OR8G3PP0DMU2 310 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 CD247P20963 164 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 PCGF2P35227 344 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 FXNQ16595 210 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 MSMPQ1L6U9 139 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 KRTAP24-1Q3LI83 254 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 METTL21CQ5VZV1 264 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 LRFN4Q6PJG9 635 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 OR4D11Q8NGI4 311 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 SNX18Q96RF0 628 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 SYT3Q9BQG1 590 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms