RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 DTX4Q9Y2E6 619 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 TRAV1-2A0A0B4J238 106 aa15.27■□□□□ 0.03
CTDP1-201ENST00000075430 GALR3O60755 368 aaPredicted RBP15.27■□□□□ 0.03
CTDP1-201ENST00000075430 PVALBP20472 110 aaPredicted RBP15.27■□□□□ 0.03
CTDP1-201ENST00000075430 PRSS3P35030 304 aa15.27■□□□□ 0.03
CTDP1-201ENST00000075430 HSD17B2P37059 387 aa15.27■□□□□ 0.03
CTDP1-201ENST00000075430 CAPZA1P52907 286 aa15.27■□□□□ 0.03
CTDP1-201ENST00000075430 TRA2BP62995 288 aaKnown RBP15.27■□□□□ 0.03
CTDP1-201ENST00000075430 RBM39Q14498 530 aaKnown RBP15.27■□□□□ 0.03
CTDP1-201ENST00000075430 PDSS1Q5T2R2 415 aa15.27■□□□□ 0.03
CTDP1-201ENST00000075430 OR1S2Q8NGQ3 325 aa15.27■□□□□ 0.03
CTDP1-201ENST00000075430 CMBLQ96DG6 245 aa15.27■□□□□ 0.03
CTDP1-201ENST00000075430 PBX4Q9BYU1 374 aa15.27■□□□□ 0.03
CTDP1-201ENST00000075430 MAP1BP46821 2468 aaKnown RBP15.26■□□□□ 0.03
CTDP1-201ENST00000075430 TMEM272A0A1B0GTI8 110 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 F8W036 122 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 APODP05090 189 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 EPHA4P54764 986 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 PPP2CBP62714 309 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 PPP2CAP67775 309 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 BLOC1S1P78537 153 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 FCRL6Q6DN72 434 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 DND1Q8IYX4 353 aaKnown RBP15.26■□□□□ 0.03
CTDP1-201ENST00000075430 TMIEQ8NEW7 156 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 OR9A4Q8NGU2 314 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 PHOSPHO1Q8TCT1 267 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 MARVELD3Q96A59 401 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 RBM18Q96H35 190 aaKnown RBP15.26■□□□□ 0.03
CTDP1-201ENST00000075430 CMSS1Q9BQ75 279 aaKnown RBP15.26■□□□□ 0.03
CTDP1-201ENST00000075430 MTCL1Q9Y4B5 1905 aaKnown RBP15.26■□□□□ 0.03
CTDP1-201ENST00000075430 TO15178 435 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 OR6A2O95222 327 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 HLA-AP01891 365 aaKnown RBP15.26■□□□□ 0.03
CTDP1-201ENST00000075430 PI3P19957 117 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 SERTAD2Q14140 314 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 MEP1BQ16820 701 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 C3orf33Q6P1S2 294 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 FBXO42Q6P3S6 717 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 KRT77Q7Z794 578 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 C12orf45Q8N5I9 185 aaPredicted RBP15.26■□□□□ 0.03
CTDP1-201ENST00000075430 RERGQ96A58 199 aaPredicted RBP15.26■□□□□ 0.03
CTDP1-201ENST00000075430 FRRS1LQ9P0K9 344 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 DAPP1Q9UN19 280 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 AUP1Q9Y679 476 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 ASXL3Q9C0F0 2248 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 TMEM235A6NFC5 223 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 ENPP2Q13822 863 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 OVCH1Q7RTY7 1134 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 TMEM200AQ86VY9 491 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 ZNF227Q86WZ6 799 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 ARMC10Q8N2F6 343 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 OR10R2Q8NGX6 335 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 LDAHQ9H6V9 325 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 ACTR10Q9NZ32 417 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 ZNF337Q9Y3M9 751 aa15.26■□□□□ 0.03
CTDP1-201ENST00000075430 A0A0B4J2A0 478 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 SPARCP09486 303 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 HNRNPA1P09651 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTDP1-201ENST00000075430 ZNF806P0C7X5 589 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 DLSTP36957 453 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 CDNFQ49AH0 187 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 TMEM240Q5SV17 173 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 STEAP1BQ6NZ63 245 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 MARCH3Q86UD3 253 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 CMIPQ8IY22 773 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 GALNT16Q8N428 558 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 CLRN3Q8NCR9 226 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 ZNF563Q8TA94 476 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 HAVCR1Q96D42 359 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 ASB16Q96NS5 453 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 AMELYQ99218 206 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 SHPKQ9UHJ6 478 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 METTL12A8MUP2 240 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 KCNJ13O60928 360 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 MAP3K8P41279 467 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 GRK6P43250 576 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 ADAM8P78325 824 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 SLC22A6Q4U2R8 563 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 EXOSC6Q5RKV6 272 aaKnown RBP15.25■□□□□ 0.03
CTDP1-201ENST00000075430 OR52W1Q6IF63 320 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 TMEM71Q6P5X7 295 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 NUDT18Q6ZVK8 323 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 OR5M9Q8NGP3 310 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 OR2L8Q8NGY9 312 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 C10orf90Q96M02 699 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 MOGAT1Q96PD6 335 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 MYADMQ96S97 322 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 ZCCHC4Q9H5U6 513 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 INPP5EQ9NRR6 644 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 FAM96BQ9Y3D0 163 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 LINC01387J3KSC0 135 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 NAT2P11245 290 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 KCNJ3P48549 501 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 DPTQ07507 201 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 ZIC1Q15915 447 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 Q499Y3 187 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 HACD4Q5VWC8 232 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 TMPRSS11FQ6ZWK6 438 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 GALNTL5Q7Z4T8 443 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 LINC00518Q8N0U6 118 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms