RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 POFUT2Q9Y2G5 429 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.3■□□□□ 0.23e-9■■■□□ 18.1
CCDC43-205ENST00000592333 SLC35F4A4IF30 521 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 PLPP3O14495 311 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 CHP2O43745 196 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 TPST2O60704 377 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 HPRP00739 348 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF35P13682 527 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 GLRXP35754 106 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 CAPZA2P47755 286 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 CDH12P55289 794 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 RPS23P62266 143 aaKnown RBP16.3■□□□□ 0.2
CCDC43-205ENST00000592333 ZP4Q12836 540 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 NPRL3Q12980 569 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 FAM120AOSQ5T036 256 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 REP15Q6BDI9 236 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF813Q6ZN06 617 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 PIWIL3Q7Z3Z3 882 aaKnown RBP16.3■□□□□ 0.2
CCDC43-205ENST00000592333 MYPOPQ86VE0 399 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-205ENST00000592333 OR5J2Q8NH18 312 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 CKAP2Q8WWK9 683 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF75AQ96N20 296 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 CPPED1Q9BRF8 314 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-205ENST00000592333 SLC19A3Q9BZV2 496 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 IKZF5Q9H5V7 419 aa16.3■□□□□ 0.2
CCDC43-205ENST00000592333 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF503-AS2A6NEH8 195 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 SYNGR3O43761 229 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 UBL3O95164 117 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 HLA-DOBP13765 273 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF14P17017 642 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-205ENST00000592333 SNTB2Q13425 540 aaKnown RBP16.29■□□□□ 0.2
CCDC43-205ENST00000592333 CARTPTQ16568 116 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 TRMT5Q32P41 509 aaKnown RBP16.29■□□□□ 0.2
CCDC43-205ENST00000592333 PHYHD1Q5SRE7 291 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 DPPA2Q7Z7J5 298 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 SVOPLQ8N434 492 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 OR6N1Q8NGY5 312 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 RNF217Q8TC41 542 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 UBASH3BQ8TF42 649 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 MRPL24Q96A35 216 aaKnown RBP16.29■□□□□ 0.2
CCDC43-205ENST00000592333 MS4A3Q96HJ5 214 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 MPP4Q96JB8 637 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 ATP6V1G3Q96LB4 118 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 MOGAT1Q96PD6 335 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 ARHGDIGQ99819 225 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 FOXB1Q99853 325 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 ULBP2Q9BZM5 246 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 DYNLRB1Q9NP97 96 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 NDUFAF1Q9Y375 327 aa16.29■□□□□ 0.2
CCDC43-205ENST00000592333 MALRD1Q5VYJ5 2156 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 MGRN1O60291 552 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 TGFAP01135 160 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 AHCYP23526 432 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 RIN1Q13671 783 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 NRN1LQ496H8 165 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 PATL1Q86TB9 770 aaKnown RBP16.28■□□□□ 0.2
CCDC43-205ENST00000592333 OR6X1Q8NH79 312 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 RASSF5Q8WWW0 418 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 C1orf159Q96HA4 380 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 TXNDC15Q96J42 360 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 MCHR1Q99705 422 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 SIKE1Q9BRV8 207 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 EMC6Q9BV81 110 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 PCDHAC1Q9H158 963 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 MED29Q9NX70 200 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 TRIM33Q9UPN9 1127 aa16.28■□□□□ 0.2
CCDC43-205ENST00000592333 OR6A2O95222 327 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 RAB36O95755 333 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 HLA-HP01893 362 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 CD79AP11912 226 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 PCMT1P22061 227 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 CBLP22681 906 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 AQP1P29972 269 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 RAB1AP62820 205 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 DUSP7Q16829 419 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 INTS11Q5TA45 600 aaKnown RBP16.27■□□□□ 0.2
CCDC43-205ENST00000592333 CARD17Q5XLA6 110 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 KRT80Q6KB66 452 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 PTOV1Q86YD1 416 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 C10orf53Q8N6V4 93 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 ARIH2OSQ8N7S6 290 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 DYDC1Q8WWB3 177 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 CHODLQ9H9P2 273 aa16.27■□□□□ 0.2
CCDC43-205ENST00000592333 SVEP1Q4LDE5 3571 aa16.27■□□□□ 0.19
CCDC43-205ENST00000592333 SLC22A23A1A5C7 686 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 M0QX08 132 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 M0R233 179 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 LILRA1O75019 489 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 ADORA3P0DMS8 318 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 LSP1P33241 339 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 CSNK1A1P48729 337 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 MRPS11P82912 194 aaKnown RBP16.26■□□□□ 0.19
CCDC43-205ENST00000592333 GALK2Q01415 458 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 CAMK2DQ13557 499 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 ZNF74Q16587 644 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 FXNQ16595 210 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 CYP51A1Q16850 503 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 METTL21CQ5VZV1 264 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 TTC33Q6PID6 262 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms