RNA–Protein interactions for RNA: ENST00000590057.5

PCSK4-209, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-209ENST00000590057 RABL3Q5HYI8 236 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 SWT1Q5T5J6 900 aaKnown RBP12.6□□□□□ -0.39
PCSK4-209ENST00000590057 NANOGP8Q6NSW7 305 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 ZNF627Q7L945 461 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 CXXC5Q7LFL8 322 aaKnown RBP12.6□□□□□ -0.39
PCSK4-209ENST00000590057 SLC46A3Q7Z3Q1 461 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 PXKQ7Z7A4 578 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 ARIH2OSQ8N7S6 290 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 OR4F15Q8NGB8 312 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 OR5J2Q8NH18 312 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 FGFBP3Q8TAT2 258 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 ADAMTS16Q8TE57 1224 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 PROX1Q92786 737 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 LRR1Q96L50 414 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 DOK1Q99704 481 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 PRSS27Q9BQR3 290 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 NANOGQ9H9S0 305 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 NOX1Q9Y5S8 564 aa12.6□□□□□ -0.39
PCSK4-209ENST00000590057 IGHV4-61A0A0C4DH41 118 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 FXYD1O00168 92 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 KPNA4O00629 521 aaPredicted RBP12.59□□□□□ -0.39
PCSK4-209ENST00000590057 PDE5AO76074 875 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 CH25HO95992 272 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 CSF3P09919 207 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 PATE4P0C8F1 98 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 ADORA3P0DMS8 318 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 IFNGR1P15260 489 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 TNFRSF1BP20333 461 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 USF1P22415 310 aaPredicted RBP12.59□□□□□ -0.39
PCSK4-209ENST00000590057 PDLIM4P50479 330 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 BIDP55957 195 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCSK4-209ENST00000590057 GGTLC2Q14390 218 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 CARTPTQ16568 116 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 ZNF74Q16587 644 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 KRT80Q6KB66 452 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 CGB2Q6NT52 195 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 ZNF813Q6ZN06 617 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 CDK20Q8IZL9 346 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 SVOPLQ8N434 492 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 TSPEARQ8WU66 669 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 SOX7Q9BT81 388 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 ZNF426Q9BUY5 554 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 TMEM120AQ9BXJ8 343 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 ZNF442Q9H7R0 627 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 SLC7A7Q9UM01 511 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 TRIM33Q9UPN9 1127 aa12.59□□□□□ -0.39
PCSK4-209ENST00000590057 SH3PXD2BA1X283 911 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 ZNF726A6NNF4 738 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 hCG_2039718K7EN88 272 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 AKAP8O43823 692 aaKnown RBP12.58□□□□□ -0.4
PCSK4-209ENST00000590057 MT-ATP6P00846 226 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 CD79AP11912 226 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 ZNF35P13682 527 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 ZNF14P17017 642 aaPredicted RBP12.58□□□□□ -0.4
PCSK4-209ENST00000590057 NPR2P20594 1047 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 NR4A2P43354 598 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 MELKQ14680 651 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 GSG1Q2KHT4 349 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 VMACQ2NL98 169 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 CHRFAM7AQ494W8 412 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 METTL21CQ5VZV1 264 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 CYB5R2Q6BCY4 276 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCSK4-209ENST00000590057 LRFN4Q6PJG9 635 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 SPATA21Q7Z572 469 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 PATL1Q86TB9 770 aaKnown RBP12.58□□□□□ -0.4
PCSK4-209ENST00000590057 CALHM3Q86XJ0 350 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 SKA3Q8IX90 412 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 TMEM54Q969K7 222 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 ULBP2Q9BZM5 246 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 PCDHAC1Q9H158 963 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 EVA1AQ9H8M9 152 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.4
PCSK4-209ENST00000590057 FKBP7Q9Y680 259 aa12.58□□□□□ -0.4
PCSK4-209ENST00000590057 TRAPPC13A5PLN9 417 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 SHOX2O60902 331 aaPredicted RBP12.57□□□□□ -0.4
PCSK4-209ENST00000590057 ASAH2BP0C7U1 165 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 NR4A1P22736 598 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 GIPRP48546 466 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 PTDSS1P48651 473 aaKnown RBP12.57□□□□□ -0.4
PCSK4-209ENST00000590057 PPOXP50336 477 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 SNTB2Q13425 540 aaKnown RBP12.57□□□□□ -0.4
PCSK4-209ENST00000590057 DAG1Q14118 895 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 TRMT5Q32P41 509 aaKnown RBP12.57□□□□□ -0.4
PCSK4-209ENST00000590057 TTC33Q6PID6 262 aaPredicted RBP12.57□□□□□ -0.4
PCSK4-209ENST00000590057 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 CCDC80Q76M96 950 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 ZNF584Q8IVC4 421 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 CCDC36Q8IYA8 594 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 LRRC58Q96CX6 371 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 MSI2Q96DH6 328 aaKnown RBP12.57□□□□□ -0.4
PCSK4-209ENST00000590057 KCNK17Q96T54 332 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 FOXB1Q99853 325 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 BPESC1Q9GZL8 116 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 POFUT2Q9Y2G5 429 aa12.57□□□□□ -0.4
PCSK4-209ENST00000590057 LOC390937A0A1W2PQ73 354 aa12.56□□□□□ -0.4
PCSK4-209ENST00000590057 LYNX1G3V0Z9 82 aa12.56□□□□□ -0.4
PCSK4-209ENST00000590057 NDUFS8O00217 210 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms