RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 C3orf14Q9HBI5 128 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 EQTNQ9NQ60 294 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 ARMCX1Q9P291 453 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 ANAPC2Q9UJX6 822 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 KCNS2Q9ULS6 477 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 TCF19Q9Y242 345 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 FAM208BQ5VWN6 2430 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 COL6A6A6NMZ7 2263 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 UBR5O95071 2799 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 FAM90A7PA6NKC0 464 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 FAM90A22PA8MWA6 464 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 FAM90A12PA8MX19 464 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 FAM90A23PA8MXZ1 464 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 G3V3Y1 287 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 RFXANKO14593 260 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 KIAA0513O60268 411 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 BCAS1O75363 584 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 UGT2B17O75795 530 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 OXSR1O95747 527 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 EPPINO95925 133 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 APOHP02749 345 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 ALOX5P09917 674 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 OR12D1P0DN82 309 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 COX4I1P13073 169 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 ETFAP13804 333 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 CNR1P21554 472 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 TBXA2RP21731 343 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 RPS4Y1P22090 263 aaKnown RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 SOAT1P35610 550 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 MAGEA8P43361 318 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 VEGFCP49767 419 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 CRYBA2P53672 197 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 NR1H2P55055 460 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 MLLT10P55197 1068 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 KCNK10P57789 538 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 OC90Q02509 493 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 PLCXD2Q0VAA5 305 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 EFR3AQ14156 821 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 RGNQ15493 299 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 CD226Q15762 336 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 ZNF141Q15928 474 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 MAPK14Q16539 360 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 SYPL1Q16563 259 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 TMEM44Q2T9K0 475 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 GRAMD1BQ3KR37 738 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 CMPK2Q5EBM0 449 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 DCST2Q5T1A1 773 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 CCNJQ5T5M9 372 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 C6orf163Q5TEZ5 329 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 PRAMEF20Q5VT98 475 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 SLC22A10Q63ZE4 541 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 REP15Q6BDI9 236 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 WDR73Q6P4I2 378 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 TNFAIP8L2Q6P589 184 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 FRRS1Q6ZNA5 592 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 ZNF621Q6ZSS3 439 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 NET1Q7Z628 596 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 GALNT10Q86SR1 603 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 SNX32Q86XE0 403 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 CALHM3Q86XJ0 350 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 PTOV1Q86YD1 416 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 ANKFN1Q8N957 763 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 FADS6Q8N9I5 356 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 TEX19Q8NA77 164 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 FAM71CQ8NEG0 241 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 OR13A1Q8NGR1 328 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 OR4C3Q8NH37 302 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 PNPT1Q8TCS8 783 aaKnown RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 GPR151Q8TDV0 419 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 TRIM63Q969Q1 353 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 RMND5BQ96G75 393 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 ANKRD27Q96NW4 1050 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 COL21A1Q96P44 957 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 SLC39A3Q9BRY0 314 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 C1QTNF5Q9BXJ0 243 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 TTTY12Q9BZ98 90 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 ZNF350Q9GZX5 532 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 FAM107BQ9H098 131 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 SLC38A1Q9H2H9 487 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 RMND5AQ9H871 391 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 ZDHHC11Q9H8X9 412 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 SCRT2Q9NQ03 307 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 KLHL1Q9NR64 748 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 ASF1BQ9NVP2 202 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 HPF1Q9NWY4 346 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 CNIH4Q9P003 139 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 ABI3Q9P2A4 366 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 LEF1Q9UJU2 399 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 ARL2BPQ9Y2Y0 163 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 KLF13Q9Y2Y9 288 aaPredicted RBP4.05□□□□□ -1.76
SMG1-206ENST00000562668 NDUFAF1Q9Y375 327 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 SNX8Q9Y5X2 465 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 LIPGQ9Y5X9 500 aa4.05□□□□□ -1.76
SMG1-206ENST00000562668 NPIPA5A0A0B4J1W7 369 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 LOC100653049A0A140TA62 436 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 A0A1B0GVC2 190 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 A0A1W2PQD3 144 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 A0A1W2PS18 150 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 DUXAA6NLW8 204 aa4.04□□□□□ -1.76
SMG1-206ENST00000562668 BBIP1A8MTZ0 92 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms