RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MAP3K3Q99759 626 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 VRK1Q99986 396 aaPredicted RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 ELOVL3Q9HB03 270 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 OR2S2Q9NQN1 319 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 ACAD8Q9UKU7 415 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 MMP17Q9ULZ9 603 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 V9GYH0 126 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 TLCD2A6NGC4 264 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 NUPL2O15504 423 aaKnown RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 SPINT1O43278 529 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 TCRBP04435 133 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 HBQ1P09105 142 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 MSR1P21757 451 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 GALP22466 123 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 FGF9P31371 208 aaPredicted RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 EEF1A1P68104 462 aaKnown RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 NR0B2Q15466 257 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 OR7A5Q15622 319 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 OR56B4Q8NH76 319 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 PATE1Q8WXA2 126 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 LMF1Q96S06 567 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 DNTTIP1Q9H147 329 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 KCNJ16Q9NPI9 418 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 LRIT1Q9P2V4 623 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 STEAP1Q9UHE8 339 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 EXO1Q9UQ84 846 aaKnown RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 CHD5Q8TDI0 1954 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 TMEM72A0PK05 275 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 TUBAL3A6NHL2 446 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 NRG2O14511 850 aaPredicted RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 PEX14O75381 377 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 S100A8P05109 93 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 PRSS3P35030 304 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 DLSTP36957 453 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 OR1D4P47884 311 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 HSD17B7P56937 341 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 OR10A3P58181 314 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 TLE3Q04726 772 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 ZNF616Q08AN1 781 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 PRICKLE4Q2TBC4 344 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 FAM205BPQ63HN1 556 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 LAIR1Q6GTX8 287 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 TMEM225Q6GV28 225 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 HEPHL1Q6MZM0 1159 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 GLCCI1Q86VQ1 547 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 RDH10Q8IZV5 341 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 MALSU1Q96EH3 234 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 GABRG3Q99928 467 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 LIN7BQ9HAP6 207 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 RARRES3Q9UL19 164 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 NPFFR2Q9Y5X5 522 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 A0A0A6YYJ9 748 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 CDC14CA4D256 554 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 E9PI62 339 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 SLC33A1O00400 549 aaPredicted RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 ZNF593O00488 134 aaPredicted RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 RAD1O60671 282 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 C1QBP02746 253 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 CFIP05156 583 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 SPI1P17947 270 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 PEBP1P30086 187 aaKnown RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 ALDH3B1P43353 468 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 DBPQ10586 325 aaPredicted RBP5.31□□□□□ -1.56
VPS50-220ENST00000544910 OPCMLQ14982 345 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 AWAT2Q6E213 333 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 VASNQ6EMK4 673 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 WDR88Q6ZMY6 472 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 NDUFAF7Q7L592 441 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 SYS1Q8N2H4 156 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 SLC35B4Q969S0 331 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 LRRC3BQ96PB8 259 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 MUTYHQ9UIF7 546 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 A0A0B4J2E0 115 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 A0A1B0GX12 115 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 hCG_1807616A0A1W2PRN6 198 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 MEGF11A6BM72 1044 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 NUDT19A8MXV4 375 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 K7EQS6 105 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 SLC16A7O60669 478 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 SLC34A2O95436 690 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 AMY2AP04746 511 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 KLK3P07288 261 aaPredicted RBP5.3□□□□□ -1.56
VPS50-220ENST00000544910 PTH2RP49190 550 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 FXYD6P3P58550 94 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 FCN2Q15485 313 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 ZNF770Q6IQ21 691 aaPredicted RBP5.3□□□□□ -1.56
VPS50-220ENST00000544910 PAPD4Q6PIY7 484 aaKnown RBP5.3□□□□□ -1.56
VPS50-220ENST00000544910 C5orf46Q6UWT4 87 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 MISPQ8IVT2 679 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 ZNF709Q8N972 641 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 ZNF565Q8N9K5 539 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 OR8D4Q8NGM9 314 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 TMEM41AQ96HV5 264 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 FOXN4Q96NZ1 517 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 C19orf12Q9NSK7 152 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 PLEKHB1Q9UF11 243 aaPredicted RBP5.3□□□□□ -1.56
VPS50-220ENST00000544910 LSM2Q9Y333 95 aaKnown RBP5.3□□□□□ -1.56
VPS50-220ENST00000544910 VWA8A3KMH1 1905 aa5.3□□□□□ -1.56
VPS50-220ENST00000544910 NPIPA2E9PIF3 369 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms