RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 MOV10Q9HCE1 1003 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 IL20Q9NYY1 176 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 GPR52Q9Y2T5 361 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 CDH10Q9Y6N8 788 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 INTS1Q8N201 2190 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 TRAV27A0A087WT01 109 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 ARPC3O15145 178 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 RAMP1O60894 148 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 ZNF432O94892 652 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 POU2F1P14859 743 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 IFNGR1P15260 489 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 CDH2P19022 906 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 CD79BP40259 229 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 CTXN1P60606 82 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 LAPTM4AQ15012 233 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 PLXDC2Q6UX71 529 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 NUFIP2Q7Z417 695 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 ADCK1Q86TW2 530 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 P2RY8Q86VZ1 359 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 STEAP2Q8NFT2 490 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 OR13C2Q8NGS9 318 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 ZNF385AQ96PM9 386 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 RBM4BQ9BQ04 359 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 C9orf16Q9BUW7 83 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 ALG12Q9BV10 488 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 RBM4Q9BWF3 364 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 POLDIP3Q9BY77 421 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 GABARAPL1Q9H0R8 117 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 OR52D1Q9H346 318 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 DCLRE1BQ9H816 532 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 NTN4Q9HB63 628 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 NRIP3Q9NQ35 241 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 SEC14L4Q9UDX3 406 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 NDRG3Q9UGV2 375 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 POFUT2Q9Y2G5 429 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 ORC6Q9Y5N6 252 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 DOPEY1Q5JWR5 2465 aa15.51■□□□□ 0.07
CLSTN3-210ENST00000540931 SLC35F4A4IF30 521 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 FAM90A27PA6NNH2 459 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 ZNF587BE7ETH6 402 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 RPL36A-HNRNPH2H7BZ11 118 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 HPRP00739 348 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 HOXB1P14653 301 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 PSMB1P20618 241 aaKnown RBP15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 SDHAP31040 664 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 HMBOX1Q6NT76 420 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 ZNF620Q6ZNG0 422 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 NCCRP1Q6ZVX7 275 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 LUZP2Q86TE4 346 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 LIX1LQ8IVB5 337 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 CCDC36Q8IYA8 594 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 PQLC1Q8N2U9 271 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 KDM8Q8N371 416 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 PARP8Q8N3A8 854 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 ZNF610Q8N9Z0 462 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 RELL2Q8NC24 303 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 C1orf162Q8NEQ5 155 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 OR9Q2Q8NGE9 314 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 OR6N1Q8NGY5 312 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 TEX47Q8TBZ9 253 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 RBP7Q96R05 134 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 OR2M2Q96R28 347 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 PRRG3Q9BZD7 231 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 ENKD1Q9H0I2 346 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 SMURF2Q9HAU4 748 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 MCCC2Q9HCC0 563 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 TAS2R16Q9NYV7 291 aa15.5■□□□□ 0.07
CLSTN3-210ENST00000540931 C16orf97H3BN30 126 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 H3BNX3 289 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 GOSR1O95249 250 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 TXNDC12O95881 172 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 F13BP05160 661 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 KLK2P20151 261 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 FUT4P22083 530 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 MPGP29372 298 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 NOS3P29474 1203 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 GUCA1AP43080 201 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 CSNK1A1P48729 337 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 BIDP55957 195 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 CLRN1P58418 232 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 ESRRGP62508 458 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 LSM11P83369 360 aaKnown RBP eCLIP15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 ACKR1Q16570 336 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 THEM4Q5T1C6 240 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 FAHD1Q6P587 224 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 NHLRC1Q6VVB1 395 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 C17orf78Q8N4C9 275 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 ARIH2OSQ8N7S6 290 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 OR2T33Q8NG76 320 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 MOSPD2Q8NHP6 518 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 ZNF775Q96BV0 537 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 BOD1Q96IK1 185 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 SNX18Q96RF0 628 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 KATNB1Q9BVA0 655 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 OPN3Q9H1Y3 402 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 PAPOLBQ9NRJ5 636 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 VNN3Q9NY84 501 aa15.49■□□□□ 0.07
CLSTN3-210ENST00000540931 PCNX1Q96RV3 2341 aa15.48■□□□□ 0.07
CLSTN3-210ENST00000540931 SERPINI2O75830 405 aa15.48■□□□□ 0.07
CLSTN3-210ENST00000540931 OSMP13725 252 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms