RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	MMP15	P51511	669 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LTB4R	Q15722	352 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TFAP2E	Q6VUC0	442 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MEPCE	Q7L2J0	689 aa	Known RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UBE3D	Q7Z6J8	389 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MRGPRE	Q86SM8	312 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZADH2	Q8N4Q0	377 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF454	Q8N9F8	522 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR56A1	Q8NGH5	318 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR5M1	Q8NGP8	315 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR2A1	Q8NGT9	310 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR14A16	Q8NHC5	309 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC41A3	Q96GZ6	507 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PEX11G	Q96HA9	241 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NARS2	Q96I59	477 aa	Known RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR14A2	Q96R54	314 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PDCD1LG2	Q9BQ51	273 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR52D1	Q9H346	318 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NOX3	Q9HBY0	568 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		Q9N2J8	555 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FANCF	Q9NPI8	374 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C20orf141	Q9NUB4	165 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IL20	Q9NYY1	176 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KIF25	Q9UIL4	384 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SCN8A	Q9UQD0	1980 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CABIN1	Q9Y6J0	2220 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CENPVL1	A0A0U1RR11	272 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RDH16	O75452	317 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZFAND5	O76080	213 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF888	P0CJ79	500 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	EPX	P11678	715 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FGF5	P12034	268 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MYF5	P13349	255 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DCTD	P32321	178 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RORA	P35398	523 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PSMB10	P40306	273 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BCL6	P41182	706 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PGD	P52209	483 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HSD17B7	P56937	341 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ETFDH	Q16134	617 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LINC00303	Q3SY05	128 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HEPHL1	Q6MZM0	1159 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RHBDD2	Q6NTF9	364 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NIPAL3	Q6P499	406 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	THSD4	Q6ZMP0	1018 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLITRK4	Q8IW52	837 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LINC00471	Q8N535	108 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	WDR34	Q96EX3	536 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LRRC46	Q96FV0	321 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GAL3ST4	Q96RP7	486 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IFT27	Q9BW83	186 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MS4A8	Q9BY19	250 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC35C2	Q9NQQ7	365 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRDM9	Q9NQV7	894 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PCDHB16	Q9NRJ7	776 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KLF15	Q9UIH9	416 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MSRB2	Q9Y3D2	182 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SPTB	P11277	2137 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TRAV27	A0A087WT01	109 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		A0A087WV48	116 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NPIPA5	A0A0B4J1W7	369 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF860	A6NHJ4	632 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NPIPA7	E9PJI5	369 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SUSD5	O60279	629 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ALOX12B	O75342	701 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZIC2	O95409	532 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NPIPA8	P0DM63	369 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MAK	P20794	623 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HIST1H1T	P22492	207 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NAA10	P41227	235 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MC3R	P41968	323 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	STAT5A	P42229	794 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KHK	P50053	298 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PDX1	P52945	283 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DCAF7	P61962	342 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SHC2	P98077	582 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	INSM1	Q01101	510 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PLGLB1	Q02325	96 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACSM1	Q08AH1	577 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IKZF1	Q13422	519 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SHE	Q5VZ18	495 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OPN5	Q6U736	354 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF793	Q6ZN11	406 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FCRLA	Q7L513	359 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PIP4P1	Q86T03	277 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMEM151B	Q8IW70	566 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	METTL27	Q8N6F8	245 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF614	Q8N883	585 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR10Z1	Q8NGY1	313 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NT5C	Q8TCD5	201 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACOT11	Q8WXI4	607 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KCTD12	Q96CX2	325 aa	Known RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LRFN5	Q96NI6	719 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR7D2	Q96RA2	312 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TEAD3	Q99594	435 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NPAS1	Q99742	590 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF416	Q9BWM5	594 aa		5.17	□□□□□ -1.58

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