RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ZCCHC24Q8N2G6 241 aaKnown RBP13.32□□□□□ -0.28
TPM3-219ENST00000509409 C11orf65Q8NCR3 313 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 NEU4Q8WWR8 484 aaPredicted RBP13.32□□□□□ -0.28
TPM3-219ENST00000509409 MSI2Q96DH6 328 aaKnown RBP13.32□□□□□ -0.28
TPM3-219ENST00000509409 SLC41A3Q96GZ6 507 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 MOGAT1Q96PD6 335 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 CPPED1Q9BRF8 314 aaPredicted RBP13.32□□□□□ -0.28
TPM3-219ENST00000509409 ULBP2Q9BZM5 246 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 BPESC1Q9GZL8 116 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 MRPL39Q9NYK5 338 aaKnown RBP13.32□□□□□ -0.28
TPM3-219ENST00000509409 NDUFAF1Q9Y375 327 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 SPEF1Q9Y4P9 236 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 GMEB1Q9Y692 573 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 CUBNO60494 3623 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 TMEM129A0AVI4 362 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 M0R3H8 397 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 PLPP3O14495 311 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 OPN1SWP03999 348 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 ADRA2AP08913 450 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 ADORA3P0DMS8 318 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 ZNF23P17027 643 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 SRD5A1P18405 259 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 HNF1AP20823 631 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 RBBP4Q09028 425 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 GSG1Q2KHT4 349 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 TRMT5Q32P41 509 aaKnown RBP13.31□□□□□ -0.28
TPM3-219ENST00000509409 GKAP1Q5VSY0 366 aaPredicted RBP13.31□□□□□ -0.28
TPM3-219ENST00000509409 IL17RELQ6ZVW7 336 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 DHDDSQ86SQ9 333 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 OR5J2Q8NH18 312 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 CKAP2Q8WWK9 683 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 TMEM43Q9BTV4 400 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 NOX3Q9HBY0 568 aa13.31□□□□□ -0.28
TPM3-219ENST00000509409 INTS9Q9NV88 658 aaKnown RBP13.31□□□□□ -0.28
TPM3-219ENST00000509409 CPSF4LA6NMK7 179 aaKnown RBP13.3□□□□□ -0.28
TPM3-219ENST00000509409 ANGPT2O15123 496 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 RAB36O95755 333 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 MT-ATP6P00846 226 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 HIST1H2ABP04908 130 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 NR4A1P22736 598 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 IGFBP5P24593 272 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 PTDSS1P48651 473 aaKnown RBP13.3□□□□□ -0.28
TPM3-219ENST00000509409 CSNK1A1P48729 337 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 BIDP55957 195 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 DUSP7Q16829 419 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 TTMPQ5BVD1 217 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 FAM120AOSQ5T036 256 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 SWT1Q5T5J6 900 aaKnown RBP13.3□□□□□ -0.28
TPM3-219ENST00000509409 ZNF613Q6PF04 617 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 TTC33Q6PID6 262 aaPredicted RBP13.3□□□□□ -0.28
TPM3-219ENST00000509409 HIST3H2AQ7L7L0 130 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 PXKQ7Z7A4 578 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 VANGL1Q8TAA9 524 aaPredicted RBP13.3□□□□□ -0.28
TPM3-219ENST00000509409 SLC26A7Q8TE54 656 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 HIST1H2ACQ93077 130 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 CGREF1Q99674 301 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 B3GNT2Q9NY97 397 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 TRIM33Q9UPN9 1127 aa13.3□□□□□ -0.28
TPM3-219ENST00000509409 LRP5LA4QPB2 252 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 RNF13O43567 381 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 FMO6PO60774 539 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 CH25HO95992 272 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 C8BP07358 591 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 IFNGR1P15260 489 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 B4GALT1P15291 398 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 MTPNP58546 118 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 RAB1AP62820 205 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 GALK2Q01415 458 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 NFYCQ13952 458 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 SELPLGQ14242 412 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 ENTPD8Q5MY95 495 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 PTOV1Q86YD1 416 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 OR6T1Q8NGN1 323 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 ARHGDIGQ99819 225 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 FOXB1Q99853 325 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 TPK1Q9H3S4 243 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 REV1Q9UBZ9 1251 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 ARFGEF3Q5TH69 2177 aa13.29□□□□□ -0.28
TPM3-219ENST00000509409 CHP2O43745 196 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 UMPSP11172 480 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 LSP1P33241 339 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 GIPRP48546 466 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 CHN2P52757 468 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 PCBP3P57721 371 aaKnown RBP13.28□□□□□ -0.28
TPM3-219ENST00000509409 NHLRC1Q6VVB1 395 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 SLC35D2Q76EJ3 337 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 PATL1Q86TB9 770 aaKnown RBP13.28□□□□□ -0.28
TPM3-219ENST00000509409 RBM45Q8IUH3 476 aaKnown RBP13.28□□□□□ -0.28
TPM3-219ENST00000509409 WDFY1Q8IWB7 410 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 SLC30A8Q8IWU4 369 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 ZNF786Q8N393 782 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 GPR32P1Q8NGA4 272 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 MRPL37Q9BZE1 423 aaKnown RBP13.28□□□□□ -0.28
TPM3-219ENST00000509409 DENND2DQ9H6A0 471 aaPredicted RBP13.28□□□□□ -0.28
TPM3-219ENST00000509409 NANSQ9NR45 359 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 GLTPQ9NZD2 209 aa13.28□□□□□ -0.28
TPM3-219ENST00000509409 LYNX1G3V0Z9 82 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 KPNA4O00629 521 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms