RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ADRA2AP08913 450 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 TACSTD2P09758 323 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 B4GALT1P15291 398 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 NR4A1P22736 598 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 AHCYP23526 432 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 APEX1P27695 318 aaKnown RBP9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 IL2RGP31785 369 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 CHN2P52757 468 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 AQP5P55064 265 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 CDH12P55289 794 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 PIGFQ07326 219 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 PUDPQ08623 228 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 CAMK2DQ13557 499 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 SQLEQ14534 574 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 MSMPQ1L6U9 139 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 CR1LQ2VPA4 569 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 AGBL2Q5U5Z8 902 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 NHLRC1Q6VVB1 395 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 RANBP3LQ86VV4 465 aaPredicted RBP9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 ARMC8Q8IUR7 673 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF786Q8N393 782 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 HIPK4Q8NE63 616 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 BHLHE22Q8NFJ8 381 aaPredicted RBP9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 OR6N1Q8NGY5 312 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 UBASH3BQ8TF42 649 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 LRR1Q96L50 414 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF75AQ96N20 296 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 SNX18Q96RF0 628 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 FOXB1Q99853 325 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 TMEM43Q9BTV4 400 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 C19orf24Q9BVV8 132 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 TPK1Q9H3S4 243 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 B3GNT2Q9NY97 397 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 MRPL39Q9NYK5 338 aaKnown RBP9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 CMAHPQ9Y471 501 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 NOX1Q9Y5S8 564 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF726A6NNF4 738 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 C11orf98E9PRG8 122 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 LYNX1G3V0Z9 82 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 PLPP3O14495 311 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 LILRA1O75019 489 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 MFN2O95140 757 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 OPN1SWP03999 348 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 LYNX1P0DP58 116 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 IFNGR1P15260 489 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF14P17017 642 aaPredicted RBP9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 PTDSS1P48651 473 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 ATP4BP51164 291 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 TRIP10Q15642 601 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 TRMT5Q32P41 509 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 SWT1Q5T5J6 900 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 DLEU7Q6UYE1 221 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF627Q7L945 461 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 PXKQ7Z7A4 578 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 PTOV1Q86YD1 416 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 SMYD1Q8NB12 490 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 MRPL24Q96A35 216 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 MCHR1Q99705 422 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 ARHGDIGQ99819 225 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 MRPL37Q9BZE1 423 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 EVA1AQ9H8M9 152 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF224Q9NZL3 707 aa9.95□□□□□ -0.82
HMGCS1-204ENST00000507293 CPSF4LA6NMK7 179 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 M0R233 179 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 RAB36O95755 333 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 MT-ATP6P00846 226 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 ADORA3P0DMS8 318 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF35P13682 527 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 GIPRP48546 466 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 CSNK1A1P48729 337 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 BIDP55957 195 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 PCBP3P57721 371 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 RIN1Q13671 783 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 NPTX1Q15818 432 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 RUNDC3AQ59EK9 446 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 GKAP1Q5VSY0 366 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF613Q6PF04 617 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 WDR88Q6ZMY6 472 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 DHDDSQ86SQ9 333 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 SNX32Q86XE0 403 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 LINC01356Q8N9X3 169 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 C11orf65Q8NCR3 313 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 GPR32P1Q8NGA4 272 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 OR5J2Q8NH18 312 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 HPS1Q92902 700 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 SYT3Q9BQG1 590 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 REV1Q9UBZ9 1251 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 LEF1Q9UJU2 399 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 SPEF1Q9Y4P9 236 aa9.94□□□□□ -0.82
HMGCS1-204ENST00000507293 CHP2O43745 196 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 SYNGR3O43761 229 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 FMO6PO60774 539 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 UBL3O95164 117 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 OR6A2O95222 327 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 C8BP07358 591 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 PATE4P0C8F1 98 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 GLRXP35754 106 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 ALDH3B1P43353 468 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 EVX1P49640 407 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 CDH15P55291 814 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms