RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PSMC5P62195 406 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 DPYSL3Q14195 570 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 PON2Q15165 354 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RAB35Q15286 201 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 HAGHQ16775 308 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 GTDC1Q4AE62 458 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 XKR4Q5GH76 650 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 IRAK1BP1Q5VVH5 260 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 C22orf42Q6IC83 251 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 C19orf48Q6RUI8 117 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 LRRC31Q6UY01 552 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 STAC2Q6ZMT1 411 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 FRA10AC1Q70Z53 315 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 BHLHA15Q7RTS1 189 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 PID1Q7Z2X4 250 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 MFSD6LQ8IWD5 586 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TPRX1Q8N7U7 411 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF491Q8N8L2 437 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 OR10A7Q8NGE5 316 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 OR1K1Q8NGR3 316 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 BAALCQ8WXS3 180 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NEIL2Q969S2 332 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 UBE2E3Q969T4 207 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 C8orf44Q96CB5 159 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 OMA1Q96E52 524 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 MOCOSQ96EN8 888 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 DUS3LQ96G46 650 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TBX15Q96SF7 602 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RNF2Q99496 336 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 LRRC1Q9BTT6 524 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 OSBPL10Q9BXB5 764 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 BEX2Q9BXY8 128 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 UCK2Q9BZX2 261 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NDEL1Q9GZM8 345 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 C1orf198Q9H425 327 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 SMYD3Q9H7B4 428 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF334Q9HCZ1 680 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 IL1RAPQ9NPH3 570 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 MTRF1LQ9UGC7 380 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NXT1Q9UKK6 140 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 FLVCR2Q9UPI3 526 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TSSC4Q9Y5U2 329 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 A0A1W2PNV4 684 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 K7EN84 100 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 EI24O14681 340 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 CHMP2AO43633 222 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 SMC2O95347 1197 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 SEC24AO95486 1093 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 GSTA1P08263 222 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 HBQ1P09105 142 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 MYL2P10916 166 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 C4BPBP20851 252 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 TEAD1P28347 426 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 ADORA1P30542 326 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 RPL9P32969 192 aaKnown RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 EVI2BP34910 448 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 UGT1A3P35503 534 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 TIMP3P35625 211 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 NPBWR2P48146 333 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 MRPL19P49406 292 aaKnown RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 PEX3P56589 373 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 CLDN18P56856 261 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 RAB40BQ12829 278 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 LAGE3Q14657 143 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 MESDQ14696 234 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 MTF1Q14872 753 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 CD226Q15762 336 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 BCL2A1Q16548 175 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 DUSP7Q16829 419 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 RPEL1Q2QD12 228 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 MS4A18Q3C1V0 323 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 CARD16Q5EG05 197 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 UTF1Q5T230 341 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 APOBEC3HQ6NTF7 200 aaKnown RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 H3F3CQ6NXT2 135 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM199XQ6PEV8 388 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 ARCQ7LC44 396 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 CCDC71Q8IV32 467 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 CCDC65Q8IXS2 484 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 LRRC34Q8IZ02 419 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 CMTM1Q8IZ96 169 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC22A15Q8IZD6 547 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM89BQ8N5H3 189 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 GVQW1Q8N7I0 195 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 ATP6V0D2Q8N8Y2 350 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 DNAAF3Q8N9W5 541 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 GATSQ8NAP1 163 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 PRSS33Q8NF86 280 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 OR2T11Q8NH01 316 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 OR6S1Q8NH40 331 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 OR5B3Q8NH48 314 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 TOMM40LQ969M1 308 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 APH1AQ96BI3 265 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 TADA1Q96BN2 335 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 BIRC7Q96CA5 298 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 SERAC1Q96JX3 654 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF641Q96N77 438 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 SH3GL1Q99961 368 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC30A2Q9BRI3 323 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms