RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 CDH12P55289 794 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 MFSD13AQ14CX5 517 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 MS4A18Q3C1V0 323 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 SWT1Q5T5J6 900 aaKnown RBP13.76□□□□□ -0.21
CHRD-213ENST00000482014 KLHL24Q6TFL4 600 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 NHLRC1Q6VVB1 395 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 LINC00114Q6XXX2 140 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 RANBP3LQ86VV4 465 aaPredicted RBP13.76□□□□□ -0.21
CHRD-213ENST00000482014 SLC30A8Q8IWU4 369 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 ANKK1Q8NFD2 765 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 MRPL24Q96A35 216 aaKnown RBP13.76□□□□□ -0.21
CHRD-213ENST00000482014 SORCS2Q96PQ0 1159 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 TMEM43Q9BTV4 400 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 NELFAQ9H3P2 528 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 SELENONQ9NZV5 590 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 ATP23Q9Y6H3 246 aa13.76□□□□□ -0.21
CHRD-213ENST00000482014 PRKDCP78527 4128 aaKnown RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 M0R3H8 397 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 TRAF3IP2O43734 574 aaPredicted RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 SLC43A1O75387 559 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 OPN1SWP03999 348 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 HOXB1P14653 301 aaPredicted RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 ROR2Q01974 943 aaKnown RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 FOXL1Q12952 345 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 NPTX1Q15818 432 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 SWI5Q1ZZU3 235 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 ANKRD16Q6P6B7 361 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 ZNF613Q6PF04 617 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 SHQ1Q6PI26 577 aaKnown RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 OR6T1Q8NGN1 323 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 OR10A6Q8NH74 314 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 RNF217Q8TC41 542 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 ZNF317Q96PQ6 595 aaPredicted RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 EPYCQ99645 322 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 MCHR1Q99705 422 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 CRNNQ9UBG3 495 aaPredicted RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 CORINQ9Y5Q5 1042 aa13.75□□□□□ -0.21
CHRD-213ENST00000482014 HEATR1Q9H583 2144 aaKnown RBP13.75□□□□□ -0.21
CHRD-213ENST00000482014 IGHV1-18A0A0C4DH31 117 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 ATP6V1G2-DDX39BF2Z307 99 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 LYPD3O95274 346 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 HPRP00739 348 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 CD247P20963 164 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 GIFP27352 417 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 PCGF2P35227 344 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 SH3BGRP55822 239 aaPredicted RBP13.74□□□□□ -0.21
CHRD-213ENST00000482014 SNRPD2P62316 118 aaKnown RBP13.74□□□□□ -0.21
CHRD-213ENST00000482014 VMACQ2NL98 169 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 TRMT5Q32P41 509 aaKnown RBP13.74□□□□□ -0.21
CHRD-213ENST00000482014 C3orf36Q3SXR2 165 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 NANOGP8Q6NSW7 305 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 CGB2Q6NT52 195 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 CCDC80Q76M96 950 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 PATL1Q86TB9 770 aaKnown RBP13.74□□□□□ -0.21
CHRD-213ENST00000482014 GLCCI1Q86VQ1 547 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 TMEM123Q8N131 208 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 TEX29Q8N6K0 151 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 SCAIQ8N9R8 606 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 OR4D11Q8NGI4 311 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 MOGAT1Q96PD6 335 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 SLC38A2Q96QD8 506 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 OR2M2Q96R28 347 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 ASPNQ9BXN1 380 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 NANOGQ9H9S0 305 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 GPR35Q9HC97 309 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 ZNF446Q9NWS9 450 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 MOKQ9UQ07 419 aa13.74□□□□□ -0.21
CHRD-213ENST00000482014 B4DSR2 109 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 FXYD1O00168 92 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 CHP2O43745 196 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 THY1P04216 161 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHRD-213ENST00000482014 HLA-DOBP13765 273 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 CRYBA2P53672 197 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 UBE2NP61088 152 aaKnown RBP13.73□□□□□ -0.21
CHRD-213ENST00000482014 ARF1P84077 181 aaKnown RBP13.73□□□□□ -0.21
CHRD-213ENST00000482014 KLF10Q13118 480 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 CYLC2Q14093 348 aaPredicted RBP13.73□□□□□ -0.21
CHRD-213ENST00000482014 COQ5Q5HYK3 327 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 ENTPD8Q5MY95 495 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 CALHM3Q86XJ0 350 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 RBM45Q8IUH3 476 aaKnown RBP13.73□□□□□ -0.21
CHRD-213ENST00000482014 UEVLDQ8IX04 471 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 GPR137CQ8N3F9 429 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 FAM169BQ8N8A8 192 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 PIK3C3Q8NEB9 887 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 TAMM41Q96BW9 452 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 LRRC58Q96CX6 371 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 FBXO17Q96EF6 278 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 ZNF837Q96EG3 531 aaPredicted RBP13.73□□□□□ -0.21
CHRD-213ENST00000482014 MRGBPQ9NV56 204 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 FGFR1OP2Q9NVK5 253 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 MRPL39Q9NYK5 338 aaKnown RBP13.73□□□□□ -0.21
CHRD-213ENST00000482014 USP22Q9UPT9 525 aa13.73□□□□□ -0.21
CHRD-213ENST00000482014 ARFGEF3Q5TH69 2177 aa13.72□□□□□ -0.21
CHRD-213ENST00000482014 A0A096LPE4 126 aa13.72□□□□□ -0.21
CHRD-213ENST00000482014 A0A1W2PPZ6 126 aa13.72□□□□□ -0.21
CHRD-213ENST00000482014 CPSF4LA6NMK7 179 aaKnown RBP13.72□□□□□ -0.21
CHRD-213ENST00000482014 LRRN3E7EW58 273 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms