RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GPR32P1Q8NGA4 272 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 OR5J2Q8NH18 312 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 ULBP2Q9BZM5 246 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 NOX3Q9HBY0 568 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 ZNF726A6NNF4 738 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 LRRN3E7EW58 273 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 PLPP3O14495 311 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 SNTB2Q13425 540 aaKnown RBP19.71■□□□□ 0.75
PTPN4-207ENST00000460162 NFYCQ13952 458 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 SELPLGQ14242 412 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 NPTX1Q15818 432 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 ZNF813Q6ZN06 617 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 ZNF540Q8NDQ6 660 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 OR6T1Q8NGN1 323 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 OR6N1Q8NGY5 312 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 THOC1Q96FV9 657 aaKnown RBP19.71■□□□□ 0.75
PTPN4-207ENST00000460162 TXNDC15Q96J42 360 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 KAT8Q9H7Z6 458 aaKnown RBP19.71■□□□□ 0.75
PTPN4-207ENST00000460162 B3GNT2Q9NY97 397 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 MALRD1Q5VYJ5 2156 aa19.71■□□□□ 0.75
PTPN4-207ENST00000460162 M0QX08 132 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 EDF1O60869 148 aaKnown RBP19.7■□□□□ 0.74
PTPN4-207ENST00000460162 HLA-HP01893 362 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 AHCYP23526 432 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 PCGF2P35227 344 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 CAMK2DQ13557 499 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 DAG1Q14118 895 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 CARTPTQ16568 116 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 ENTPD8Q5MY95 495 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 INTS11Q5TA45 600 aaKnown RBP19.7■□□□□ 0.74
PTPN4-207ENST00000460162 SPATA21Q7Z572 469 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 SVOPLQ8N434 492 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 ADAMTS16Q8TE57 1224 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 NEU4Q8WWR8 484 aaPredicted RBP19.7■□□□□ 0.74
PTPN4-207ENST00000460162 FOXB1Q99853 325 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 DENND2DQ9H6A0 471 aaPredicted RBP19.7■□□□□ 0.74
PTPN4-207ENST00000460162 VIPAS39Q9H9C1 493 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 NPHS2Q9NP85 383 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 POFUT2Q9Y2G5 429 aa19.7■□□□□ 0.74
PTPN4-207ENST00000460162 CPSF4LA6NMK7 179 aaKnown RBP19.69■□□□□ 0.74
PTPN4-207ENST00000460162 SERPINI2O75830 405 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 VIMP08670 466 aaKnown RBP19.69■□□□□ 0.74
PTPN4-207ENST00000460162 ADORA3P0DMS8 318 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 APEHP13798 732 aaKnown RBP19.69■□□□□ 0.74
PTPN4-207ENST00000460162 B4GALT1P15291 398 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 CSNK1A1P48729 337 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF74Q16587 644 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 FAM166AQ6J272 317 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 WDR88Q6ZMY6 472 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 HDXQ7Z353 690 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 MPP4Q96JB8 637 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 FOXN4Q96NZ1 517 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 DOK1Q99704 481 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 BEX2Q9BXY8 128 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 SLC19A3Q9BZV2 496 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 BPESC1Q9GZL8 116 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 PCDHAC1Q9H158 963 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 DYNLRB1Q9NP97 96 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 FBXL3Q9UKT7 428 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 KCNS2Q9ULS6 477 aa19.69■□□□□ 0.74
PTPN4-207ENST00000460162 IGHV4-61A0A0C4DH41 118 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 TRAPPC13A5PLN9 417 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 RNF212BA8MTL3 300 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 LMX1BO60663 402 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 OR6A2O95222 327 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 CD79AP11912 226 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF14P17017 642 aaPredicted RBP19.68■□□□□ 0.74
PTPN4-207ENST00000460162 CD247P20963 164 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 METTL21CQ5VZV1 264 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 KRT80Q6KB66 452 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 TTC33Q6PID6 262 aaPredicted RBP19.68■□□□□ 0.74
PTPN4-207ENST00000460162 WDFY1Q8IWB7 410 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 VANGL1Q8TAA9 524 aaPredicted RBP19.68■□□□□ 0.74
PTPN4-207ENST00000460162 RASSF5Q8WWW0 418 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 TAMM41Q96BW9 452 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF426Q9BUY5 554 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 SHARPINQ9H0F6 387 aa19.68■□□□□ 0.74
PTPN4-207ENST00000460162 A0A0G2JND7 137 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 C11orf98E9PRG8 122 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 UBL3O95164 117 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 LYPD3O95274 346 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 RAB36O95755 333 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 THY1P04216 161 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 IFNGR1P15260 489 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF23P17027 643 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 NR4A1P22736 598 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 IGFBP5P24593 272 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 GIFP27352 417 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 BIDP55957 195 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 ZP4Q12836 540 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 TRMT5Q32P41 509 aaKnown RBP19.67■□□□□ 0.74
PTPN4-207ENST00000460162 IQCCQ4KMZ1 466 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 OR4D11Q8NGI4 311 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 OR10A6Q8NH74 314 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 OR6X1Q8NH79 312 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 SLC26A7Q8TE54 656 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF75AQ96N20 296 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 NANSQ9NR45 359 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF224Q9NZL3 707 aa19.67■□□□□ 0.74
PTPN4-207ENST00000460162 ZNF229Q9UJW7 825 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms